Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mpal_1258 |
Symbol | |
ID | 7271536 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosphaerula palustris E1-9c |
Kingdom | Archaea |
Replicon accession | NC_011832 |
Strand | + |
Start bp | 1285900 |
End bp | 1287000 |
Gene Length | 1101 bp |
Protein Length | 366 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 643569892 |
Product | ABC-2 type transporter |
Protein accession | YP_002466316 |
Protein GI | 219851884 |
COG category | [V] Defense mechanisms |
COG ID | [COG0842] ABC-type multidrug transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.793324 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.287343 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACATCAT CCCTGCTGCG GGGAGCCTTT GCGATCTTCA AACGGGATTT TCAGAAGTTC CTGAGCAATC CGTTTGTGAT CCTGATGACC CTCTTCATGC CGATCATGTA CCTGATCATC TTCGGCAGCG CGATGGGCGG GTCTATCAGC CACATCCCGA TCGGGGTGGT GCAGGACGAG CCGTACCTGG TGGAGACTCC GCTCTTCGCC TCGGCAGTTG CTGGATTGAG CACGATGCAG CAGGTGGACA ACCCTCCAAC CTTTGATGTA ACGGTCTTCA CCGATGAGGC GAGCGCCCGG CGTGCGGTCA CTGACGGAAG GATCATGGCT GCTGTCATCT TCCCCTCCAG CATCTCGGCG GATAATACGA TCCGCATGTA CATGGACAGT TCTGAGTTTA CCATCCCCGC ACTGATCCAG GCTGGATTGA ACGGTGTCCT GGCCCAGAAC GGGGCGCACA ATCCGGTGCA GGTCACCAAG ATCTATGGGG ATATCGGTTA CTTGCAGTTC TTTGGGGTTG GTGTCATTGT CATGGCCATC TTCATGACCA CGATGATGGG GGGCGGCATG GCGATGATCC GGGACCGGGA GATGGGGATC GTCGAAGGGT ATCTGGTCAC GCCGGTGAAA CGGTCGAGCA CCCTCCTCGG CATCATCGCA AGCGGCACGG TCAAGGGATT TCTCGCAGGA TTTATCATCC TTCTTGTCGA CCTCTTCGTG GCCGGGATCG TCATCGACAG TGCGGTGAAC TTTCTGCTGA TCCTGGCTGT CATCTTCATC ATCAGCATCG GACTCACCAG TCTGGTGGTC GCTTTCGCCT CCCGCTTTGC AAACCAGCAG ATCTTCGCCT CCTCTGTCGC GTTCCTGAAC CTGATCCTCT TCATGACCAG CGGTGCTTTT TACCCGACAC TCGGGATGCC GGACTGGCTC CGCTGGATCA CGGTGATCAA TCCTGAGTCC TACGGCGTGC ATGCCCTTCG CTCCCTGGTT CTCAGGGGTC AGGGGCTCAA TCTCATCGGA ATCGACCTGC TGGCGCTGAT CATCTTCTCG GTCTTTGCGA TCGCGATCGG CATTGCGACC TTCCGACGGA CCCTCGATTG A
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Protein sequence | MTSSLLRGAF AIFKRDFQKF LSNPFVILMT LFMPIMYLII FGSAMGGSIS HIPIGVVQDE PYLVETPLFA SAVAGLSTMQ QVDNPPTFDV TVFTDEASAR RAVTDGRIMA AVIFPSSISA DNTIRMYMDS SEFTIPALIQ AGLNGVLAQN GAHNPVQVTK IYGDIGYLQF FGVGVIVMAI FMTTMMGGGM AMIRDREMGI VEGYLVTPVK RSSTLLGIIA SGTVKGFLAG FIILLVDLFV AGIVIDSAVN FLLILAVIFI ISIGLTSLVV AFASRFANQQ IFASSVAFLN LILFMTSGAF YPTLGMPDWL RWITVINPES YGVHALRSLV LRGQGLNLIG IDLLALIIFS VFAIAIGIAT FRRTLD
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