Gene Mpal_1258 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpal_1258 
Symbol 
ID7271536 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosphaerula palustris E1-9c 
KingdomArchaea 
Replicon accessionNC_011832 
Strand
Start bp1285900 
End bp1287000 
Gene Length1101 bp 
Protein Length366 aa 
Translation table11 
GC content57% 
IMG OID643569892 
ProductABC-2 type transporter 
Protein accessionYP_002466316 
Protein GI219851884 
COG category[V] Defense mechanisms 
COG ID[COG0842] ABC-type multidrug transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.793324 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.287343 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACATCAT CCCTGCTGCG GGGAGCCTTT GCGATCTTCA AACGGGATTT TCAGAAGTTC 
CTGAGCAATC CGTTTGTGAT CCTGATGACC CTCTTCATGC CGATCATGTA CCTGATCATC
TTCGGCAGCG CGATGGGCGG GTCTATCAGC CACATCCCGA TCGGGGTGGT GCAGGACGAG
CCGTACCTGG TGGAGACTCC GCTCTTCGCC TCGGCAGTTG CTGGATTGAG CACGATGCAG
CAGGTGGACA ACCCTCCAAC CTTTGATGTA ACGGTCTTCA CCGATGAGGC GAGCGCCCGG
CGTGCGGTCA CTGACGGAAG GATCATGGCT GCTGTCATCT TCCCCTCCAG CATCTCGGCG
GATAATACGA TCCGCATGTA CATGGACAGT TCTGAGTTTA CCATCCCCGC ACTGATCCAG
GCTGGATTGA ACGGTGTCCT GGCCCAGAAC GGGGCGCACA ATCCGGTGCA GGTCACCAAG
ATCTATGGGG ATATCGGTTA CTTGCAGTTC TTTGGGGTTG GTGTCATTGT CATGGCCATC
TTCATGACCA CGATGATGGG GGGCGGCATG GCGATGATCC GGGACCGGGA GATGGGGATC
GTCGAAGGGT ATCTGGTCAC GCCGGTGAAA CGGTCGAGCA CCCTCCTCGG CATCATCGCA
AGCGGCACGG TCAAGGGATT TCTCGCAGGA TTTATCATCC TTCTTGTCGA CCTCTTCGTG
GCCGGGATCG TCATCGACAG TGCGGTGAAC TTTCTGCTGA TCCTGGCTGT CATCTTCATC
ATCAGCATCG GACTCACCAG TCTGGTGGTC GCTTTCGCCT CCCGCTTTGC AAACCAGCAG
ATCTTCGCCT CCTCTGTCGC GTTCCTGAAC CTGATCCTCT TCATGACCAG CGGTGCTTTT
TACCCGACAC TCGGGATGCC GGACTGGCTC CGCTGGATCA CGGTGATCAA TCCTGAGTCC
TACGGCGTGC ATGCCCTTCG CTCCCTGGTT CTCAGGGGTC AGGGGCTCAA TCTCATCGGA
ATCGACCTGC TGGCGCTGAT CATCTTCTCG GTCTTTGCGA TCGCGATCGG CATTGCGACC
TTCCGACGGA CCCTCGATTG A
 
Protein sequence
MTSSLLRGAF AIFKRDFQKF LSNPFVILMT LFMPIMYLII FGSAMGGSIS HIPIGVVQDE 
PYLVETPLFA SAVAGLSTMQ QVDNPPTFDV TVFTDEASAR RAVTDGRIMA AVIFPSSISA
DNTIRMYMDS SEFTIPALIQ AGLNGVLAQN GAHNPVQVTK IYGDIGYLQF FGVGVIVMAI
FMTTMMGGGM AMIRDREMGI VEGYLVTPVK RSSTLLGIIA SGTVKGFLAG FIILLVDLFV
AGIVIDSAVN FLLILAVIFI ISIGLTSLVV AFASRFANQQ IFASSVAFLN LILFMTSGAF
YPTLGMPDWL RWITVINPES YGVHALRSLV LRGQGLNLIG IDLLALIIFS VFAIAIGIAT
FRRTLD