| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpal_1248 |
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| Symbol | |
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| ID | 7271526 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosphaerula palustris E1-9c |
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| Kingdom | Archaea |
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| Replicon accession | NC_011832 |
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| Strand | + |
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| Start bp | 1276657 |
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| End bp | 1277301 |
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| Gene Length | 645 bp |
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| Protein Length | 214 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 643569882 |
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| Product | V-type ATPase, D subunit |
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| Protein accession | YP_002466306 |
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| Protein GI | 219851874 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1394] Archaeal/vacuolar-type H+-ATPase subunit D |
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| TIGRFAM ID | [TIGR00309] H(+)-transporting ATP synthase, vacuolar type, subunit D |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.188247 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.274152 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGAACTG CTGATATCAA ACCAACCAGA TCGGAACTTC TCGCGGTCAA GCGACGGATC
CGGTTATCAG ATCGGGCACA CTCCCTGCTG AAGAGAAAAC GGGATGGATT GATGCTGGAA
TTGATGCGGG TGATTGGAGA ACTGAAACAG GTACAGCACG AACTTGCCGC ACGATATGAT
GCTTCACAGC AACTGATCGC TGTCGCGTAC ATGATGGAAG GAGCGATCGG AGTGGCGATC
GCTGCAGAGT CGATCGAGCA GATTCCAACG ATCGAGCGGG GTTTGAAGCA TCTTCTTGGC
GTGGGGGTGC CGGTTTTTCA TGAGCAGGGG GTGAAGAAGA ATCTCGACGA GCGTGGGTAC
TGCATCCTCG GAACAGATTC GGTGATCGAT GATGTGGCTG GAGCCTTCGA GGATCTGCTC
GACGTCGTGA TTCGTGCAGC AGGTCTTCAG ACCGAACTCC GATTGATCCT CGCCGAGTTC
GTCCGCACCC GCCGCCGGGT CAGGGCCCTT GAGTACCGGG TGATCCCGGA CCTGATCGAG
GAGCGAAACT ATATCCAGTT GAGGCGGGAC GAGATGGACC GGGAGGAGGC ATCACGCCTT
TTTCATATTA AGAAGGTCAA GATCGGTCGG AATCCTGTCA AATGA
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| Protein sequence | MRTADIKPTR SELLAVKRRI RLSDRAHSLL KRKRDGLMLE LMRVIGELKQ VQHELAARYD
ASQQLIAVAY MMEGAIGVAI AAESIEQIPT IERGLKHLLG VGVPVFHEQG VKKNLDERGY
CILGTDSVID DVAGAFEDLL DVVIRAAGLQ TELRLILAEF VRTRRRVRAL EYRVIPDLIE
ERNYIQLRRD EMDREEASRL FHIKKVKIGR NPVK
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