Gene Mpal_1223 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpal_1223 
Symbol 
ID7271501 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosphaerula palustris E1-9c 
KingdomArchaea 
Replicon accessionNC_011832 
Strand
Start bp1256111 
End bp1257307 
Gene Length1197 bp 
Protein Length398 aa 
Translation table11 
GC content52% 
IMG OID643569860 
Productpeptidase M24 
Protein accessionYP_002466284 
Protein GI219851852 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0006] Xaa-Pro aminopeptidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0533616 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGATCA CCATGCCTGT CCCTGTCAGT GAACTTATGG GCCGAATGAG TCGTTTTAGA 
ACTCAGATGG ATAAAAATCA TCCTGATTGG GAGATTGTGG CCATTCTCGG AAAGGTCGAC
CTTTATTACT TCACCGGTAC CATCCAGGAC GGCATTCTCC TCATTCCCCG GAATGATGAA
GCGGTGTTCT GGGTCCGTCA GAGTTATGAA CGGGCCCTTG ATGAATCCAG GTCCCCCTGC
ATCAGAAAGA TGAGCAGGTA CCGTGATATT GCTGCGGTCA TGGGGACATT TCCTGCAACG
CTGTACCTTG AGATGGAACT GGTGACGATG GCACAGGTTC AGAGACTGCA GAAATCTCTC
AATTTTACCG ATGTGAAGGC GGTTGATGCC GAGGTGGCCG CTGTCAGGTC GGTGAAGAGC
GGCTACGAAC TCTCCCTTAT GGAGAAGGCT GGAAGGATCC ACCGGCATGT GCTGGAGGAT
TGTATGCCTT CCCTCCTCTC AGAAGGGATC GATGAGGTAG AACTCAACAG CGACCTTTAC
TCCCTGATGG TGAAGGAAGG TCACCAGGGG ATCATCCGGT TTGACATGTT CAATGAGATG
ATCCTGGGAC AGATCGGTTT TGGTGTCAGT TCCATCTATC CGACCTGTGT CAACACCCCT
GGAGGGATTT CAGGTATGCA TCCGGCGGTA CCGCTGATGG GATGCCGGGA GAGGCGACTC
CGGAAGGGCG ACCTTGTTGT TGTGGATATC GGGTGTGGGG TTGAGGGATA CCAGACCGAC
AAGACCATGA CCTACATGTT TGGTTCGCCC ATTCCTGATG CAGCGGTCCA GGTGCATGAG
CACTGTGTGG ATATCCAGAA TGAACTGGCT TCGCTCCTGA AACCGGGTGC GATTCCTTCA
GAGATCTACT CTACCATCAT CGATGGGCTG AGTCCTGAAT TCCTAAAAGA TTTTATGGGA
TTCGGAGGGC ATCAGGTGAA GTTCCTTGGT CATGGTATCG GATTGTGGAT CGATGAAAAA
CCCGTGATCG CGAAAGGGTT TGATGAACCG CTGGAGGAAG GGATGGTCTT TGCACTTGAG
CCCAAAAAAG GAATCCAGGG AGTCGGGCTG GTTGGCATCG AGAATACCTT TGTCGTGACT
CCTCAGGGGG GTCGATGCAT CACCGGTGAT AATCCCGGAC TGATCCCGGT ATACTGA
 
Protein sequence
MMITMPVPVS ELMGRMSRFR TQMDKNHPDW EIVAILGKVD LYYFTGTIQD GILLIPRNDE 
AVFWVRQSYE RALDESRSPC IRKMSRYRDI AAVMGTFPAT LYLEMELVTM AQVQRLQKSL
NFTDVKAVDA EVAAVRSVKS GYELSLMEKA GRIHRHVLED CMPSLLSEGI DEVELNSDLY
SLMVKEGHQG IIRFDMFNEM ILGQIGFGVS SIYPTCVNTP GGISGMHPAV PLMGCRERRL
RKGDLVVVDI GCGVEGYQTD KTMTYMFGSP IPDAAVQVHE HCVDIQNELA SLLKPGAIPS
EIYSTIIDGL SPEFLKDFMG FGGHQVKFLG HGIGLWIDEK PVIAKGFDEP LEEGMVFALE
PKKGIQGVGL VGIENTFVVT PQGGRCITGD NPGLIPVY