| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpal_1217 |
|---|
| Symbol | |
|---|
| ID | 7271495 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanosphaerula palustris E1-9c |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_011832 |
|---|
| Strand | - |
|---|
| Start bp | 1251121 |
|---|
| End bp | 1252035 |
|---|
| Gene Length | 915 bp |
|---|
| Protein Length | 304 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 643569854 |
|---|
| Product | PP-loop domain protein |
|---|
| Protein accession | YP_002466278 |
|---|
| Protein GI | 219851846 |
|---|
| COG category | [D] Cell cycle control, cell division, chromosome partitioning |
|---|
| COG ID | [COG0037] Predicted ATPase of the PP-loop superfamily implicated in cell cycle control |
|---|
| TIGRFAM ID | [TIGR00269] conserved hypothetical protein TIGR00269 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.987774 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.0958558 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCGCCT GCGATCGCTG CAACGAGCAC GCGGTCTACT TCTCCCGGGG AGATGGGGCG
CACCTCTGTG GAGCACACCT GATGGAGAAG GTGGAGGCGA AGACTGCCGG CATGCTCGCC
TCATACACCC TTGCAGATAA CGAACGGATA GCAGTCGCGC TCAGCGGCGG CAAGGACAGC
ACGGTGCTGC TCTGGCTTAT GAACATGCTG CTCGGGAAGA GGGCTGCAGA CCGCCTGGTC
GCCATCACCG TCGACGAAGG GATCAGAGAC TATCGCGATG AGACACTGGC AGCGGCACGG
CGCCTGACCC ACAGGCTCGG GATCCGGCAT ATCATCGTCT CGTTTCAGGA TCTCTTCGGA
GCCGACCTCG ATAGCCTGCT GATCGGAAAC AGGGAACGGG CCTGTTCTGT CTGCGGAGTC
TACCGGCGAC AGGCACTGCA GCAGACTGCC GTGGAGGCAG GGGCGGGTGT CCTCGCGACC
GGCCACTGTC TGGACGACGA GGCCCAGTCG GTTCTGATGA ATTACCTGCG CGGAGACCTC
ACCCGGATCG CCGGCACCCT GCCGGAGGGG ACCGGGTACA TTCCGCGGAT CAAACCGCTC
GGACGGGTCA GCGAGAAGGA GGTGGTCGTG TATGGAATGG TCGCATCGCT CCTCTCACCC
CTTCCGGAGT GCCCGTACAC GGCCCATGCC CTCAGGGCCG AGGTGCGGCG TGCACTCGGG
GTACTTGAGT ATCGGTTCCC CGGTACCATG CTTCGAATCG TGGAAGGAGA GGCAGACCTG
AAACGAACGG TCAGCGGTAT GGTTCCACCA TCGGCGTTGT CGAAGTGCGA CCGCTGTGGG
GCGCCCTGCT CCGGCACCAT CTGCCAGCGC TGCAAAATAG AAGATCTACT CGACAGGCGC
GGGAATCTCC AGTGA
|
|---|
| Protein sequence | MIACDRCNEH AVYFSRGDGA HLCGAHLMEK VEAKTAGMLA SYTLADNERI AVALSGGKDS
TVLLWLMNML LGKRAADRLV AITVDEGIRD YRDETLAAAR RLTHRLGIRH IIVSFQDLFG
ADLDSLLIGN RERACSVCGV YRRQALQQTA VEAGAGVLAT GHCLDDEAQS VLMNYLRGDL
TRIAGTLPEG TGYIPRIKPL GRVSEKEVVV YGMVASLLSP LPECPYTAHA LRAEVRRALG
VLEYRFPGTM LRIVEGEADL KRTVSGMVPP SALSKCDRCG APCSGTICQR CKIEDLLDRR
GNLQ
|
|---|
| |