Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mpal_1196 |
Symbol | |
ID | 7271474 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosphaerula palustris E1-9c |
Kingdom | Archaea |
Replicon accession | NC_011832 |
Strand | + |
Start bp | 1228918 |
End bp | 1230627 |
Gene Length | 1710 bp |
Protein Length | 569 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 643569833 |
Product | TrkA-N domain protein |
Protein accession | YP_002466257 |
Protein GI | 219851825 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0569] K+ transport systems, NAD-binding component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGATCGTCT CCACCCTCCG TTCCATCAGC CGCTGGATTA CCCGCACCGC TTCGACGCAG CGGATCCGAA TATATCTGGT CATCTTTCTG GTTCAGATCA CCGCATACAC ACTGATATTT CATGCCCTCT ACCCGCTGAC CGAGCAGAAG CCCATCTCCT GGGTGGGAGC CCTCTTCTTT GTCATAGAGA CCATGACCAC GACCGGCTAT GGGGACCTCC TCCCGTTTTA TAACCAGATC ACGCAGGCCT TCTCGATGGT GATGATCGTG ACCGGGGTGG TGATGATCTT CATGGTGATC CCGTTGCTGT TCACCCCGTA CCTGACTCAA CTGGTCAAGC CCACACCCCC GCGTCGCCCT CCTCACATCC TCCGGGATCA CGTAGTGATC ATGGGATACG ACGATCAGGC CAGGTCTCTG ATCGAGAGCC TGATGATCGA GGAGATCGAC GTCGTGATCG TGGAGGCTGA CGAGGAGACT GCGATGAGGG CCACGATGCG ATACCGAAGG CACGCATATG TGATCTGGGG GGAATACACC CACCCAGCCA CCCATGCTCA TGCCTGTGTC AGCACTGCAC GTTATGTGAT CGTCAATGGG GACGAGCGTT CGACGGCCAA CATCATCCTC GGGATTCGGG AGATCACAGA TGCCCATATC ATTGCGGTCG TGGATAATCT CTCGTTTGAT CGGTATCTTC GGTATGCCGG TGCCGAGTAC GTCTTCTCCC CGAAGAACTC GACCGGCAAG ATCCTGGCTC GCCATGCGCT CGTGACCCCG GACATTGCGG CGGTCGTCGA TGTTATTGGT TCGGATCTCC CGTTTTCACT CGCCAATCCG CAGAGTCAGT CGCTCTGGCT GATAAAGATC CCAATCCTTC CCGGGACACG GGTTGTGAAC CGAACGATCC GAGAACTCGA TCTCTTTCAG CGTTATAACG TCAATATCGT GATCCTCTGG CATGCCGGGG AATTCCTGCT CACCCCTGAT CCTGACAAGG TGATCGACAC CCGGACAATG CTCTTTCTCA TCGGGAAGGC GGAGGATATC GCCAGCGCGA TAGAAGCACT CTTCCTGCCC CCCGATGGAG ATAAAACCTT CGCCGTGATC GCCGGGTTTG GGGATGTCGG GGCAGCGGCC TATAAGGAAC TGACCGGAAA GGGGATCGAG TGTGTGGTGG TCGATCAGCA CCCCCAGACA AGCCCGTCGG TGATCGGTAA TGCAGAGGAC GAAGAGGTCC TCAAGAAGAC GCATCTTGAG AAGGCACAGA TCTGCATCGT CGCTCTGAAC GATGACAGTG TCAACATCTT TACGACCCTG ATGGCACGAA ATATCAACCC GGATCTGAAG ATCTTTGCCC GTGCCAATCA TGCAGGGTCT GTCGACAAAC TTTACCGGGC AGGAGCCGAC TTTGTCGCGC TTCAGCCGAC GATCGGCGGG CAGACGATAG CAGGGATTGT CCTCGCAGAT CATGTGAAGA TCCTGCTCGA TCTCCCTGGC GGGCAGAAAG TGGTGATGAA GCACTGGATG AAGAGCCATG CTCGGACGGT CAACTGGCTC GAGCGGAAGA GCGGCGTCCG GGTGCTCGGG GTCGAGGGCT CGAGCCGGTC CCTGGTCCGG CCGAACGGTG ATGAAGTTCT GCTCGAAGGG GATAAGGTGA TTCTGATGGG TGAGGTTAAG ATGTTGAAAC GGTGTATACA ATTAATGTAG
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Protein sequence | MIVSTLRSIS RWITRTASTQ RIRIYLVIFL VQITAYTLIF HALYPLTEQK PISWVGALFF VIETMTTTGY GDLLPFYNQI TQAFSMVMIV TGVVMIFMVI PLLFTPYLTQ LVKPTPPRRP PHILRDHVVI MGYDDQARSL IESLMIEEID VVIVEADEET AMRATMRYRR HAYVIWGEYT HPATHAHACV STARYVIVNG DERSTANIIL GIREITDAHI IAVVDNLSFD RYLRYAGAEY VFSPKNSTGK ILARHALVTP DIAAVVDVIG SDLPFSLANP QSQSLWLIKI PILPGTRVVN RTIRELDLFQ RYNVNIVILW HAGEFLLTPD PDKVIDTRTM LFLIGKAEDI ASAIEALFLP PDGDKTFAVI AGFGDVGAAA YKELTGKGIE CVVVDQHPQT SPSVIGNAED EEVLKKTHLE KAQICIVALN DDSVNIFTTL MARNINPDLK IFARANHAGS VDKLYRAGAD FVALQPTIGG QTIAGIVLAD HVKILLDLPG GQKVVMKHWM KSHARTVNWL ERKSGVRVLG VEGSSRSLVR PNGDEVLLEG DKVILMGEVK MLKRCIQLM
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