Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mpal_1194 |
Symbol | |
ID | 7271472 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosphaerula palustris E1-9c |
Kingdom | Archaea |
Replicon accession | NC_011832 |
Strand | - |
Start bp | 1227240 |
End bp | 1228097 |
Gene Length | 858 bp |
Protein Length | 285 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 643569831 |
Product | protein of unknown function RIO1 |
Protein accession | YP_002466255 |
Protein GI | 219851823 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0478] RIO-like serine/threonine protein kinase fused to N-terminal HTH domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCACTTT CAGCAGATAC CATCAGGACT CTCCATCCCT ATGAGGTCAA GATCCTGCTC GCCCTCGAAC AGTTGATGAA GCATTACCAG TGGGTTCCGC TTGAAATTAT TAAGAAGGCG ACCAAGTTCT CCGATTCAGA ACTGGATTTC AGGCTGAGAA GGCTGATCGC CCGGGACATG ATCAGGTACG ACGTGGTCCC GTACGAGGGC TACTCGCTGA TCTTCAACGG GTACGATTCG ATGGCCCTTC ATGCCCTGGC CAAAAAAAAG ACGATCTCAT CGCTCGGCTG CCTGATTGGA GAGGGAAAGG AGTCCAGGGT CTTCGAGGCG CTCGGGCTCG GTCCGGTTGC ATTGAAGTTC CATCGGGTCG GACAGCGCTC GTTCCAGTCG GCCAGGGTGA ACCGGGAGTA CATGCCCGGG TCGACCCACT GCTCATGGCT CTACGCCTCC CGCCTCTCTG CAGAGCGTGA GTTCGCAGCC TTAAAGATAC TTCACGAGTC GGTCAACGTC CCGCTACCGA TCGACCATAA CCGGCATGTG ATCGTGATGT CGTTCATCCC GGGTGTGAAC CTGAACAAGT GCACACTCGA AGCTCCGGAG GAGGTCTTCG ACGAGATCAT CAGAAACATC AGGGCTGCCT ACCTGTGCGG AGTGATCCAT GCAGACATGA GCGAGTTCAA TATCATGGTC AGCGACGGGG AGGTCACGCT GATCGATTGG CCGCAGTGGA TCGAGCCGGC ACATCCGAAT GCGATCCCCA TACTGGAGAA CGATCTCGGC AACCTGATCG CCTACTTCAA ACGAAAGTAT AATCTCTCAT ATGCACTGGA AGAGATCGTG CAATGCGTGA TCACCTGA
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Protein sequence | MPLSADTIRT LHPYEVKILL ALEQLMKHYQ WVPLEIIKKA TKFSDSELDF RLRRLIARDM IRYDVVPYEG YSLIFNGYDS MALHALAKKK TISSLGCLIG EGKESRVFEA LGLGPVALKF HRVGQRSFQS ARVNREYMPG STHCSWLYAS RLSAEREFAA LKILHESVNV PLPIDHNRHV IVMSFIPGVN LNKCTLEAPE EVFDEIIRNI RAAYLCGVIH ADMSEFNIMV SDGEVTLIDW PQWIEPAHPN AIPILENDLG NLIAYFKRKY NLSYALEEIV QCVIT
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