Gene Mpal_1194 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpal_1194 
Symbol 
ID7271472 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosphaerula palustris E1-9c 
KingdomArchaea 
Replicon accessionNC_011832 
Strand
Start bp1227240 
End bp1228097 
Gene Length858 bp 
Protein Length285 aa 
Translation table11 
GC content55% 
IMG OID643569831 
Productprotein of unknown function RIO1 
Protein accessionYP_002466255 
Protein GI219851823 
COG category[T] Signal transduction mechanisms 
COG ID[COG0478] RIO-like serine/threonine protein kinase fused to N-terminal HTH domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCACTTT CAGCAGATAC CATCAGGACT CTCCATCCCT ATGAGGTCAA GATCCTGCTC 
GCCCTCGAAC AGTTGATGAA GCATTACCAG TGGGTTCCGC TTGAAATTAT TAAGAAGGCG
ACCAAGTTCT CCGATTCAGA ACTGGATTTC AGGCTGAGAA GGCTGATCGC CCGGGACATG
ATCAGGTACG ACGTGGTCCC GTACGAGGGC TACTCGCTGA TCTTCAACGG GTACGATTCG
ATGGCCCTTC ATGCCCTGGC CAAAAAAAAG ACGATCTCAT CGCTCGGCTG CCTGATTGGA
GAGGGAAAGG AGTCCAGGGT CTTCGAGGCG CTCGGGCTCG GTCCGGTTGC ATTGAAGTTC
CATCGGGTCG GACAGCGCTC GTTCCAGTCG GCCAGGGTGA ACCGGGAGTA CATGCCCGGG
TCGACCCACT GCTCATGGCT CTACGCCTCC CGCCTCTCTG CAGAGCGTGA GTTCGCAGCC
TTAAAGATAC TTCACGAGTC GGTCAACGTC CCGCTACCGA TCGACCATAA CCGGCATGTG
ATCGTGATGT CGTTCATCCC GGGTGTGAAC CTGAACAAGT GCACACTCGA AGCTCCGGAG
GAGGTCTTCG ACGAGATCAT CAGAAACATC AGGGCTGCCT ACCTGTGCGG AGTGATCCAT
GCAGACATGA GCGAGTTCAA TATCATGGTC AGCGACGGGG AGGTCACGCT GATCGATTGG
CCGCAGTGGA TCGAGCCGGC ACATCCGAAT GCGATCCCCA TACTGGAGAA CGATCTCGGC
AACCTGATCG CCTACTTCAA ACGAAAGTAT AATCTCTCAT ATGCACTGGA AGAGATCGTG
CAATGCGTGA TCACCTGA
 
Protein sequence
MPLSADTIRT LHPYEVKILL ALEQLMKHYQ WVPLEIIKKA TKFSDSELDF RLRRLIARDM 
IRYDVVPYEG YSLIFNGYDS MALHALAKKK TISSLGCLIG EGKESRVFEA LGLGPVALKF
HRVGQRSFQS ARVNREYMPG STHCSWLYAS RLSAEREFAA LKILHESVNV PLPIDHNRHV
IVMSFIPGVN LNKCTLEAPE EVFDEIIRNI RAAYLCGVIH ADMSEFNIMV SDGEVTLIDW
PQWIEPAHPN AIPILENDLG NLIAYFKRKY NLSYALEEIV QCVIT