| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpal_1182 |
|---|
| Symbol | |
|---|
| ID | 7270455 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanosphaerula palustris E1-9c |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_011832 |
|---|
| Strand | - |
|---|
| Start bp | 1216697 |
|---|
| End bp | 1217143 |
|---|
| Gene Length | 447 bp |
|---|
| Protein Length | 148 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 643569822 |
|---|
| Product | UspA domain protein |
|---|
| Protein accession | YP_002466246 |
|---|
| Protein GI | 219851814 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0589] Universal stress protein UspA and related nucleotide-binding proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.146743 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACATTAT TCAAAAAGAT ACTGATAGCA ACTGATGGAT CAGAGAACAA CCAGACAGCT
GTAGAAACGG GAATTGAGAT AGCTCAGGCC TGTGGTTCGA ATGTATACGT TGTATACGTG
ATCGATATGC GGACATTCGA GTCATTACCA GCAGATGTTG GGATGAGGGA TACATACCTG
CTGCTCCAGA ACGAAGCAAA TACGGTTCTC GATCGAGTAA GAAAACTGGG TGGAGACCTT
GCGTTAGAGA CTAAGATCCT TGAAGGTAGA CCTGCAACCG AGATCGTGGA GTTTGCAGCA
GAGAACAGTA TCGATCTTAT CGTAATAGGA ACACAGGGAA AAACCGGTAT CAAACGACTC
CTCCTAGGAA GTGTAGCTGA AACGGTGATT CGATCGGCAA CCAGTAAAGT GCTTGTGGTA
AAAAATAATC CAATCACCGA AACTTAA
|
|---|
| Protein sequence | MTLFKKILIA TDGSENNQTA VETGIEIAQA CGSNVYVVYV IDMRTFESLP ADVGMRDTYL
LLQNEANTVL DRVRKLGGDL ALETKILEGR PATEIVEFAA ENSIDLIVIG TQGKTGIKRL
LLGSVAETVI RSATSKVLVV KNNPITET
|
|---|
| |