| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpal_1173 |
|---|
| Symbol | |
|---|
| ID | 7270440 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanosphaerula palustris E1-9c |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_011832 |
|---|
| Strand | - |
|---|
| Start bp | 1203870 |
|---|
| End bp | 1204673 |
|---|
| Gene Length | 804 bp |
|---|
| Protein Length | 267 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 643569808 |
|---|
| Product | protein of unknown function DUF81 |
|---|
| Protein accession | YP_002466238 |
|---|
| Protein GI | 219851806 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0730] Predicted permeases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGTTCGGTT ACAGTATTGC GTTTTTCATT GCTGGGGGGA TCGGCCTGAT CGCTTCCATT
ATTGGAATGG GAGGAGGTTT TCTCTATGTC CCTACGCTCA CACTGCTCTT CGGTTTGGAC
CAGAAGACAG CTGTTGGAAC CAGTCTTGCA GCGATGATCT TCTCATCGAG TACTGCTACA
CTCATATACT GGAGACAGAA AAAAATTCTG ATTACTCTTG CGGCACTCCT GACCCTGCCC
GCAATGATAT TTTCTATGCT CGGTTCGCTC ATCACCGTGT ATTTCGACGC GAGGATCCTG
GTCATCCTTT TTGCACTCGT ACTGATCCTC ATGTCCCTGC AGATGCTTGT TCCTTCCCTC
TGCTTTGTCC CGGCGATCAC ATGGGGGCCA TCCATCGCAA TCAACCCGTC GGTCTCTCGT
GAACATAGCA AACCGATCCG GGTTCCCTGC ATTCACCTTG TGATATGGGG AGCGATGGGG
GGGTTGGTGA GCGGGATTAC TGGAACCAGC GGTGGGGCGC TTTTTGTCCC GGCCCTCGTC
GTCCTTGGAG TCCCGATACA TTTGGCGGTT GCGACATCCC TTCTAACGAT CATCCCCACC
TCGATCACAG GAGCTGCCAC CCACATCGCT CTCGGAAATA TCTCCCTACC CTACGTGGTA
GTTTACGGAG CTGGTGCAGT TCTCGGTGCA TTTGCTGGAG CATCTCTTGC TCCGCGAATC
CAGGCAGATC ATATCAAGAG AGTGTTTGGA ATCCTCCTGA TCAGTATTGC ACTCTTGATG
ATTCAGCAGA AAATTCTGGG CTAA
|
|---|
| Protein sequence | MFGYSIAFFI AGGIGLIASI IGMGGGFLYV PTLTLLFGLD QKTAVGTSLA AMIFSSSTAT
LIYWRQKKIL ITLAALLTLP AMIFSMLGSL ITVYFDARIL VILFALVLIL MSLQMLVPSL
CFVPAITWGP SIAINPSVSR EHSKPIRVPC IHLVIWGAMG GLVSGITGTS GGALFVPALV
VLGVPIHLAV ATSLLTIIPT SITGAATHIA LGNISLPYVV VYGAGAVLGA FAGASLAPRI
QADHIKRVFG ILLISIALLM IQQKILG
|
|---|
| |