Gene Mpal_1156 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpal_1156 
Symbol 
ID7270420 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosphaerula palustris E1-9c 
KingdomArchaea 
Replicon accessionNC_011832 
Strand
Start bp1185942 
End bp1187102 
Gene Length1161 bp 
Protein Length386 aa 
Translation table11 
GC content55% 
IMG OID643569789 
ProductCystathionine gamma-lyase 
Protein accessionYP_002466222 
Protein GI219851790 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0626] Cystathionine beta-lyases/cystathionine gamma-synthases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGGTTTG ATACAAAAGC AATTCATGCC GGCGAAGAAC CGGACCTTAC AGGACATCCC 
AGCGGAGATG TCGTCGTTCC GATTCACCTG GCGTCCACAT TTGCCCGCCG GGATGTCGAT
GAGCCAACCG GGGGCTTTGA ATATTCCCGA AGCGGAAACC CCACGCGGTT TGCACTTGAA
CAGAAACTTG CTGCGATTGA GAACGCACGA TTTGGCCTGG CATTCTCCTC AGGGCTGGCA
GCCGAGACCA CGCTCTGCCT GAGCCTGCTC AGGGGAGGCG ATCATGTGGT CGCCTTTGAC
GATCTCTATG GAGGGACGAG GCGCCTTTTT AGCCAGGTGT TTCAGGAACA GTTCGATATC
GAATTCTCGT TCGTCGACGC TCGGGACCCG GAGAATGTGA AGGCAGCGAT CCGGAAAAAC
ACCCGTCTCA TATGGCTGGA GTCGCCGACA AATCCTTTAC TGAGACTCTG TGATATTCAG
GAGATCGCGA AAATCGCCCA TGAAGCCGGG GCTCTCGTCG TCGTGGACAA TACATTTGCA
AGCCCGTATT TCCAGCATCC AATCGAACGA GGGGCGGACG TCGTGGTGCA CAGCACGACC
AAGTACATCA ATGGCCACAG CGATTCGGTG GGCGGGGCGC TGATAACATC CGATGAAGAC
CTGAACAAAA AGTTCCGGTT TCACCAGAAC GCGGCGGGGG CGATTCTCTC TCCGTTCGAC
AGTTTTCTCG TCTCCCGGGG GATCAAGACA CTGGCATTGC GGATGGAACG GCATGAGAAG
AATGCACTTC TGGTGGCGCA GTTCTTATCA ACGCACAAAA AAGTTGTTGC AGTCCATTAT
CCGGGTCTTG CATCGCATCC CCAGTATGCA CTGGCACGAA AACAGATGAC CGGCTTCTCA
GGTATGCTCT CCTTCGAACT GAAGGGCGGG GAGGCAGAGG CGAAGACGTT CCTCAGAAAC
CTGCGGTTAT TCGCACTCGG AGAGAGCCTT GGTGGGGTCG AGTCCCTGAT CGAGCACCCG
GCAACAATGA CCCATGCGTC CATTCCATAT GCAGAACGCC AAAAAGTGGG CGTGAGCGAT
TCCCTGGTTC GGATCTCCGT AGGTATCGAA AACGTGGAAG ATCTCATTGC AGATCTCGAT
CAGGCATTGG GATCCATCTG A
 
Protein sequence
MGFDTKAIHA GEEPDLTGHP SGDVVVPIHL ASTFARRDVD EPTGGFEYSR SGNPTRFALE 
QKLAAIENAR FGLAFSSGLA AETTLCLSLL RGGDHVVAFD DLYGGTRRLF SQVFQEQFDI
EFSFVDARDP ENVKAAIRKN TRLIWLESPT NPLLRLCDIQ EIAKIAHEAG ALVVVDNTFA
SPYFQHPIER GADVVVHSTT KYINGHSDSV GGALITSDED LNKKFRFHQN AAGAILSPFD
SFLVSRGIKT LALRMERHEK NALLVAQFLS THKKVVAVHY PGLASHPQYA LARKQMTGFS
GMLSFELKGG EAEAKTFLRN LRLFALGESL GGVESLIEHP ATMTHASIPY AERQKVGVSD
SLVRISVGIE NVEDLIADLD QALGSI