Gene Mpal_1144 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpal_1144 
Symbol 
ID7270408 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosphaerula palustris E1-9c 
KingdomArchaea 
Replicon accessionNC_011832 
Strand
Start bp1173676 
End bp1174749 
Gene Length1074 bp 
Protein Length357 aa 
Translation table11 
GC content46% 
IMG OID643569777 
ProductNMT1/THI5 like domain protein 
Protein accessionYP_002466210 
Protein GI219851778 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.144377 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAAAAA AAATACAGTA TGTCATCATC GCAATTTTCG TAATTGCGGT TATCGGTATC 
GCTTTAGGAA TATCCCTGAC CGGAAATAAA ACGGTAAGTA CGACAAAGAC CCAGACAGTA
TCCGGAACGA ACCAAGCATC AGGAAGCTCT CCATCGACCG CATCAAACAC TTCAGACACG
GGATTGTTCA AACTACGAGC TCCATCAATG TCGTCAGTAA GCGTCATTAA TCTGGCAGAT
GAACTCGGAT ATTACAAAGA GAACGGTATC GCCATTGAAT ATACTGGAAC GACGAACGGA
GGACCGGAGA ATATCATGAC CGTGGCATCC GGCAGTAACG ATGTCGGATT GTCGGCGTTC
TCAGCGATAG TGAACGCTAT TGCGAAAGGA ACAAAGATCA AAGTTGTCGT TCCTTCGATA
GGTACATCCG TCGACAATCC GGATTACAAA TGGTATGCAC TGAACACAAG TTCCATTAAA
ACCGCCAGCG ATCTCAAAGG AAAGACCATC GCGGTTAACA CGCTCGGAGC TCAGGCAGAT
TACGTCACCC GAGCCTATCT GTATCAAAAC AACCTGACTC CTGCAGATGT TCAACTGGTC
GTGCTCCCCT ATGAAAACAT GGAACAGGCA TTAAAACAGG GACAGGTTGA CGTTATTGCA
CCAAATGGGA ATTTCTGGAA GAAAGCAGAA GCAGACGGTG GAGTCAGAAC ACTCTTTACC
GATGCTCAAG TGACCGGGGA TCAGGTTAAA ACCGGGACAT TCATGTCGAC TGATTTCATT
GAGAAACACC CGGACATCGC AAAGAAATTT GTGAATGCGA CCACGAAAGC CATCGAATGG
GACAAACAGA ACAGAGACCA ATCCCGGGTC CTCTTAGCAA AGTTCCTCAG TGAGAATAGT
GGTAATTCAA CCCTAGCCTC ATACTTCAGT GGCTGGTCAA TACGGACTCC CCCGATTATT
ACAGATTCTG ACGTTCAGTT CTGGATAGAC GTGATGGTAA AAGAAGGGAC TCTGAAGACG
GGACAGCTCA AACCCTCTGA CATCTACACC AATGAATTCA ACCCATACGC CTAG
 
Protein sequence
MEKKIQYVII AIFVIAVIGI ALGISLTGNK TVSTTKTQTV SGTNQASGSS PSTASNTSDT 
GLFKLRAPSM SSVSVINLAD ELGYYKENGI AIEYTGTTNG GPENIMTVAS GSNDVGLSAF
SAIVNAIAKG TKIKVVVPSI GTSVDNPDYK WYALNTSSIK TASDLKGKTI AVNTLGAQAD
YVTRAYLYQN NLTPADVQLV VLPYENMEQA LKQGQVDVIA PNGNFWKKAE ADGGVRTLFT
DAQVTGDQVK TGTFMSTDFI EKHPDIAKKF VNATTKAIEW DKQNRDQSRV LLAKFLSENS
GNSTLASYFS GWSIRTPPII TDSDVQFWID VMVKEGTLKT GQLKPSDIYT NEFNPYA