| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpal_1140 |
|---|
| Symbol | |
|---|
| ID | 7270404 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanosphaerula palustris E1-9c |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_011832 |
|---|
| Strand | - |
|---|
| Start bp | 1170806 |
|---|
| End bp | 1171216 |
|---|
| Gene Length | 411 bp |
|---|
| Protein Length | 136 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 643569773 |
|---|
| Product | Mov34/MPN/PAD-1 family protein |
|---|
| Protein accession | YP_002466206 |
|---|
| Protein GI | 219851774 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1310] Predicted metal-dependent protease of the PAD1/JAB1 superfamily |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.182997 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCCTTC AACCAGATAT CATGGAATCT CTGTTTACCC AAGCAGAGTA TGAAGCCCCG
ATCGAGGCCT GTGGGTATCT CGCAGGTACG GATGGGCAGA TCACCCGTCA TTTCCCACTG
ACCAACATCG ATGGAAAAGA GGATCACTTC TCGTTCGACC CGCAGGAACA GTTTGCCACC
CTGAAAGCGG CACGGCAGGA GGGACTCAGC ATCATCGGGA TGTATCACAG CCATCCGGCT
TCGCCTGCAC GACCATCACC AGAAGACGTC CGGTTGGCAT ATGACCCGAC GATCGTGTAT
ATTATTATTT CACTCATGAA TGACACAAGA ACCGTACGTG GATTTTATAT CCGGAAAGGA
GAGGTTGTTG AAGAACCATT GACAATCGGG GAAAATACCA ATGACCAATG A
|
|---|
| Protein sequence | MILQPDIMES LFTQAEYEAP IEACGYLAGT DGQITRHFPL TNIDGKEDHF SFDPQEQFAT
LKAARQEGLS IIGMYHSHPA SPARPSPEDV RLAYDPTIVY IIISLMNDTR TVRGFYIRKG
EVVEEPLTIG ENTNDQ
|
|---|
| |