| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpal_1123 |
|---|
| Symbol | |
|---|
| ID | 7271040 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanosphaerula palustris E1-9c |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_011832 |
|---|
| Strand | + |
|---|
| Start bp | 1152920 |
|---|
| End bp | 1153120 |
|---|
| Gene Length | 201 bp |
|---|
| Protein Length | 66 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 643569756 |
|---|
| Product | transcriptional regulator, XRE family |
|---|
| Protein accession | YP_002466189 |
|---|
| Protein GI | 219851757 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1476] Predicted transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.503479 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGAACA ACCTCAGAAT CTTCCGGACG GTCAACAACC TGACACAGGA AAAACTGGCA
GAAAAACTCG GGGTCACAAG ACACGCCATC ATCGCGATCG AGAACGAGCG TTATGACCCT
TCTCTCAGTC TCGCCTACCG GATCTCCGAC CTGTTCGGTG TGCTGATCGA GGATATTTTT
ATCCATGAAA AAATGGAGTG A
|
|---|
| Protein sequence | MKNNLRIFRT VNNLTQEKLA EKLGVTRHAI IAIENERYDP SLSLAYRISD LFGVLIEDIF
IHEKME
|
|---|
| |