Gene Mpal_1122 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpal_1122 
Symbol 
ID7271039 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosphaerula palustris E1-9c 
KingdomArchaea 
Replicon accessionNC_011832 
Strand
Start bp1152531 
End bp1152923 
Gene Length393 bp 
Protein Length130 aa 
Translation table11 
GC content56% 
IMG OID643569755 
Producthypothetical protein 
Protein accessionYP_002466188 
Protein GI219851756 
COG category[S] Function unknown 
COG ID[COG4854] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.518295 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGAAAA ATCATGCCAC CATAGTTGGG ATCGTGGTCT TCATCGCCAT GTGTGCCGGC 
ATAATGTATG GAGTGCGGTC AGGCAACGCG GCGGTCTCCG TCTTTTCGTT CCTCGCCGGT
GCTGTCCTTA TTTCCCTGCT GAAGAGAGGT GTCGACTCCG TCATCGAGGA CGAGTGGACC
AGGCTCGTTG AACAGAAGAC CGCAAACCTG ACCCTGAACG TCACATCAAT CCTCTTCGCG
ATCATCGGTC TCGTCCTCAT CACCATCAGC GGCCCTGGCC AGAACTTCGA CCAGGCCGTC
TTCGCTATCG CAGGTTTTCT CATCACCCTC GCCATCGTTC ATATCGCGAC CACCATCTAT
TACTCTCACA CCCTCCGTGG GAACGGGCCA TGA
 
Protein sequence
MRKNHATIVG IVVFIAMCAG IMYGVRSGNA AVSVFSFLAG AVLISLLKRG VDSVIEDEWT 
RLVEQKTANL TLNVTSILFA IIGLVLITIS GPGQNFDQAV FAIAGFLITL AIVHIATTIY
YSHTLRGNGP