| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpal_1073 |
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| Symbol | |
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| ID | 7270989 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosphaerula palustris E1-9c |
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| Kingdom | Archaea |
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| Replicon accession | NC_011832 |
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| Strand | - |
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| Start bp | 1110799 |
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| End bp | 1112637 |
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| Gene Length | 1839 bp |
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| Protein Length | 612 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 643569708 |
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| Product | phosphoesterase RecJ domain protein |
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| Protein accession | YP_002466142 |
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| Protein GI | 219851710 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1107] Archaea-specific RecJ-like exonuclease, contains DnaJ-type Zn finger domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0779999 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.569108 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATCAAT CATCAGAAGT TGTGGTATAC CGGCTCGGAC CCTCATGCGA CCTCGGCGAT
GTCGAAGAGG GTGCGATCTA TCTAGGAAAG GTGCAGGGGT TTGCGAACTT CGGAACCTTT
GTGATGCTCA GTGACCGGGT CAAGGGGCTC GTCCATAAGA CCAATGTCAG GACCGAACAC
GCTGAACGGG ATGAGATCCT GGTCAGAGTT AAGGCGATCC GGCCGAACGG GAACATCGAT
CTTGAAGAAG TGATCCTGCC GTCCTACGAG GTGAAGTCCG TCACGCGGAC CGTCACCGTC
ACCAGACTCG CAGACCTTGG AAACCGAATC GGAAGGACCG TGACGGTGAT GGGCGAGATC
GCCCAGATCA AGCAGACCTC CGGGCCGACG ATCTTCACCG TCGTCGACGA ATCCGGGAGC
GAGAACGCAG CGGCGTTCGT CGAAGCCGGG GTCAGGGCGT ACCCGGAGGT AGAACTCGGA
TCCCTGGTCC AGCTCGAAGG CCAGGTCATG CAGCGGAACA ACCAGTTGCA GATCGAAGTC
AGGGCGATCT CGGTACTCAC CGGAGACGAG GCCGCTGAGG TGACCGAACG GATCGAGCAG
GCGCTCGATG CCCGGGCAGA GCCCGAAGAG ATCCCCTTGA TGGTCGAGAG CGAAGTCATG
ACCGAACTTC GGCCTGAGAT GCGACGGATT GCAAAGGCCA TCAGGCGTGC AATCTTCACT
TCTCAACCGA TCGTGCTCCG CCACCATGCA GATGCGGACG GGATCTGCTC GGCCGTAGCC
ATCGAACAGG CCGTCGTCTC GCTGATCAAG CAGAGCGGCG GAGACTTCGA TGCCGACTAC
TTCCTCTTCA AGCGTGCCCC ATCTAAGGCG CCGTTCTACG AGATTGAGGA CATCACTCGG
GACCTCGACT TTGCCCTGAA GGACAACATC AGGTATGGGC AGAAGATGCC GCTGATCCTG
CTGACCGACA ACGGGTCGAC CGAGGAGGAC GAACCGGCGC TGAAGCTGGC GAAGGTCTTC
GGGCTCGAGG TGCTGGTCGT CGACCACCAC CACCCGGACG CCGTGATCGA TCAGTACCTG
ATCGGACATG TGAACCCCTA CCATGCCGGC GGAGACTTCG GAATCACAGC CGGGATGCTC
GGGACCGAGA TCGCACGGCT GATCAATCCG TCAGTGGAGT CGTTGATCCG CCACCTGCCG
GCGATTGCCG GGGTCGGGGA CCGGAGCGAA GCCCCCGAAC GACAGCGGTA CCTGGACCTG
ATCAAGGAGC AGTACAGCGA GGATGACTGC AAGGCGATGG CCCTGGCCCT CGACTACGAA
CAGTTCTGGC TCCGGTTCAA CGACGGCCGC GAACTGATCA AGGAGATCCT GGACCTGACC
GGCAAGAACG AGCGGCACAC CGAGTTCGTG CGGCTGCTGG TCGAAGGGGC GAACGCTGCC
ATTGAGGACC AGATGTCCGC GACGATGCCA CATGTTCGGG AGCAGACCCT CTCAAACGGG
GCCAACCTAT TCCTGCTCGA TGTAGAGATC CATGCCCACA AGTTCACGTT CCCGCCGCCC
GGCAAGACCT CGGGCGAGGT ACACGACCGG CTCTGCAAGC AACATGCCGG CGAACCGGTG
GTCACGATCG GATTCGGGCC GGACTTTGCC GTGCTCAGAT CCAAGGGTGT GCTGATGAAC
ATCCCGCGGA TGGTCAGGGA ACTCCGGACC GAGATCAGCG GCGGCGGGAT CAGCGGCGGC
GGCCACCTGG TCGTCGGCTC GATCAAATTC GTCGAAGGGA TGCGGGACCA GGTCCTCGAA
GGGCTGATCG CGAAGATCGC CGAGGCCGAG GTCGAGTGA
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| Protein sequence | MNQSSEVVVY RLGPSCDLGD VEEGAIYLGK VQGFANFGTF VMLSDRVKGL VHKTNVRTEH
AERDEILVRV KAIRPNGNID LEEVILPSYE VKSVTRTVTV TRLADLGNRI GRTVTVMGEI
AQIKQTSGPT IFTVVDESGS ENAAAFVEAG VRAYPEVELG SLVQLEGQVM QRNNQLQIEV
RAISVLTGDE AAEVTERIEQ ALDARAEPEE IPLMVESEVM TELRPEMRRI AKAIRRAIFT
SQPIVLRHHA DADGICSAVA IEQAVVSLIK QSGGDFDADY FLFKRAPSKA PFYEIEDITR
DLDFALKDNI RYGQKMPLIL LTDNGSTEED EPALKLAKVF GLEVLVVDHH HPDAVIDQYL
IGHVNPYHAG GDFGITAGML GTEIARLINP SVESLIRHLP AIAGVGDRSE APERQRYLDL
IKEQYSEDDC KAMALALDYE QFWLRFNDGR ELIKEILDLT GKNERHTEFV RLLVEGANAA
IEDQMSATMP HVREQTLSNG ANLFLLDVEI HAHKFTFPPP GKTSGEVHDR LCKQHAGEPV
VTIGFGPDFA VLRSKGVLMN IPRMVRELRT EISGGGISGG GHLVVGSIKF VEGMRDQVLE
GLIAKIAEAE VE
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