| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpal_1059 |
|---|
| Symbol | |
|---|
| ID | 7270975 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanosphaerula palustris E1-9c |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_011832 |
|---|
| Strand | + |
|---|
| Start bp | 1091167 |
|---|
| End bp | 1091562 |
|---|
| Gene Length | 396 bp |
|---|
| Protein Length | 131 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 643569695 |
|---|
| Product | Sjogrens syndrome scleroderma autoantigen 1 |
|---|
| Protein accession | YP_002466129 |
|---|
| Protein GI | 219851697 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1645] Uncharacterized Zn-finger containing protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.812754 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.252759 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCAGCAA AAGCAGACGA GATAATGGCA GAATACCTGC TTCGGGGTGG AAAGATGCTC
TCCAAGGGAT GCAGGGTCTG CGGGAGCCCG CTCTTCTGTA TCAAAGGTGA GGAGTGCTGT
GTGGTCTGCG CCGAGGAGGA GAAGCAGCAG CGGGAGAAGG CGTCTCAACC CGTTCTGGAG
CCCGAGAGGC TTCTGACGAT GCCAGCCCTC GAGTCGGTGA AGTCCCAGGA TCTGTCGGTG
GTCGGGACTG TGGAGCGGAA CCTGGTCGCT GAAGAACTGC AGGCCACCGT GGTGAACCTC
TGCAGACGGG TGCAGGGTGA GCCCGACCCT GAACGATGTG CGGTACTGCT TGATTGTGTC
AGAACCGCCG TTTTGACCCT GAACGAACTC CGATAG
|
|---|
| Protein sequence | MPAKADEIMA EYLLRGGKML SKGCRVCGSP LFCIKGEECC VVCAEEEKQQ REKASQPVLE
PERLLTMPAL ESVKSQDLSV VGTVERNLVA EELQATVVNL CRRVQGEPDP ERCAVLLDCV
RTAVLTLNEL R
|
|---|
| |