| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpal_1055 |
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| Symbol | |
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| ID | 7270971 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosphaerula palustris E1-9c |
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| Kingdom | Archaea |
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| Replicon accession | NC_011832 |
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| Strand | + |
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| Start bp | 1085236 |
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| End bp | 1087155 |
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| Gene Length | 1920 bp |
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| Protein Length | 639 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 643569691 |
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| Product | multi-sensor signal transduction histidine kinase |
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| Protein accession | YP_002466125 |
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| Protein GI | 219851693 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2205] Osmosensitive K+ channel histidine kinase |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.345165 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGGTGCC GTGACAACTA TCTTCAGGAG AACGTGCGGG TGAATGGGGA GGTGAAAGGC
CCGGTGGTGA ACAGAACGGG GTGGAAGGCC TGGTTTTTCC GACCGGTTCC CCATGCGGCA
CTGATCGCAG CCGCTTCCTT GCTGGTATTG TTCCCCTACT GGTGGCTTGC AATTCGGTGG
TTCGCTAACT TCAACCTCAC CTCGGAATCC ACCTATGCAT TCACCTCAGT TACGCTGATG
CTGGTGTTGA TCACGGCAGA CTCCCTGTTT CTCTTCGTCT ACTTTCATGA CGCCGGGAAG
CTCGCAATCG AAGGGAGAAC CCGGGAACTC ATACAGCAAG AGGCACTGCT GCGGCGTGAA
CTGAACCTGA ACCGGGCGCT GGCCGACCTC GCCGGTGCAC TGGTCACCCC TGGACGGATC
ATCGAGGAGG TCACAATGCT GGTACTCTCC TCTGCCAAAG AACTGACCGG GAGCCCGCAG
GGCTTTGTCT CGGTGGTCGA CGAGAAGACC GGCTTGATGA CCAGCCCGAC CCTGAACGCG
ATGGTGGCTG AAGGTGGGTC TGAATGCTCT TCGTCTGATC AGACGACCCT GTTCTCACGC
AGACCTGACG GAACATATTA TGGACTGATA GGTCACTGCC TGAACACCGG TAAACCCATC
TTCACCAATG CTCCGGATCT CCACCCATCT ACACCTGACC TACCAGAAGG ACATTTTCCG
GTCACCTCGT TTCTGGCAGC ACCGATCGTA CAGGTCGATG CGACCGTTGT CGGTCAGATT
GCATTGGCGA ACGCTCCTGA TGGGTATACT GACTGGGAAC TGACTGCGGT CAGCAGGCTC
ACAGAACTGT TCTCCCTGGC GATCCAGCGG GAACAGGTCA ACTCATCGTT TCGGTCCAGG
GGCAAACAAC TCTCACTGAT CATCGACGGT GTGCCGGCCC AGATTGGGTA CGTGGATGCA
GATGAACGAT ACCTGTATGT GAACCAGGCG TATGCTGACT GGTACGGGTT TCCGCGGGAT
TCGTTCGTTG GAAGAGGGAT ATGGGAGGTT CTGGATGAGG AGACCTACCG GAGTTCTTCG
GCCTGCTTTA GCAGGGTGCT GGCCGGAGAG TCTGTGAAGA TGGATTATTA TACAACAGGG
CGGGACGATT ATCAGCATTA CCTGCATGTT GGTTTCATGC CTCAGCGGGA TGAGGCCGGG
CAGGTGGTCG CTTTCTTTAT GCTGACCCAG GATATCACCG ATCAGAAGCG GGCTGAGGAG
GGGCTTCGGC AGGCGAATAG AAAATTAAAT CTACTCTCCG GGATCACCCG TCACGATATT
CAGAACCAGT TGACAGCCCT GCTTGGATAT ATAGATCTCT CTCTGGAGAT GACTGATGAT
AATAACCTGC AGGTGATCTT CCGTCGGGAG AACGAACAGG TCGCTCAGAT CCGATCAGAG
ATCACCTTCA CCAAGGGCTA CGAAGAGGTC GGGGTCCATT CCCCTGAATG GCAGAAGGTG
GGGATGCTGA TTGAGAATGC GGAACTGATG ATCCCTGCTG GGGCAGTCCA CCTTTATTCT
ACGCTTGAGA ACCTGGAGAT CTATGCAGAC CCGTTGTTGA TGCGGGTTTT TTATAATCTG
ATCGAGAACG CTCTCCGCCA TGGTCACAGT GTCACCGAGA TCCGGTTCTC CATGCGTCCT
GGTGACGCAG GCACGCTGGT ACTGATCTGT GAGGATGATG GCGACGGAGT ATCGGAAGAT
ACAAAAGAGC GGATCTTTAA CAAAGGTGTC GGTTCCAACA CAGGGCTCGG ACTCTTCCTG
ACCCGGGAGA TCCTCGCAAT TACTGGCATC ACGATCACTG AGACCGGGAC GCCTGGTCGG
GGTGCACGGT TTGAGATGGT CCTGCCGAAG GGTGGATACC GGAACTTTGT TTTTTCCTGA
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| Protein sequence | MRCRDNYLQE NVRVNGEVKG PVVNRTGWKA WFFRPVPHAA LIAAASLLVL FPYWWLAIRW
FANFNLTSES TYAFTSVTLM LVLITADSLF LFVYFHDAGK LAIEGRTREL IQQEALLRRE
LNLNRALADL AGALVTPGRI IEEVTMLVLS SAKELTGSPQ GFVSVVDEKT GLMTSPTLNA
MVAEGGSECS SSDQTTLFSR RPDGTYYGLI GHCLNTGKPI FTNAPDLHPS TPDLPEGHFP
VTSFLAAPIV QVDATVVGQI ALANAPDGYT DWELTAVSRL TELFSLAIQR EQVNSSFRSR
GKQLSLIIDG VPAQIGYVDA DERYLYVNQA YADWYGFPRD SFVGRGIWEV LDEETYRSSS
ACFSRVLAGE SVKMDYYTTG RDDYQHYLHV GFMPQRDEAG QVVAFFMLTQ DITDQKRAEE
GLRQANRKLN LLSGITRHDI QNQLTALLGY IDLSLEMTDD NNLQVIFRRE NEQVAQIRSE
ITFTKGYEEV GVHSPEWQKV GMLIENAELM IPAGAVHLYS TLENLEIYAD PLLMRVFYNL
IENALRHGHS VTEIRFSMRP GDAGTLVLIC EDDGDGVSED TKERIFNKGV GSNTGLGLFL
TREILAITGI TITETGTPGR GARFEMVLPK GGYRNFVFS
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