| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpal_1025 |
|---|
| Symbol | |
|---|
| ID | 7271759 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanosphaerula palustris E1-9c |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_011832 |
|---|
| Strand | + |
|---|
| Start bp | 1052518 |
|---|
| End bp | 1053120 |
|---|
| Gene Length | 603 bp |
|---|
| Protein Length | 200 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 643569662 |
|---|
| Product | NADPH-dependent F420 reductase |
|---|
| Protein accession | YP_002466096 |
|---|
| Protein GI | 219851664 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2085] Predicted dinucleotide-binding enzymes |
|---|
| TIGRFAM ID | [TIGR01915] NADPH-dependent F420 reductase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGATGC GCCTCTCCCA GAAGCATGAT GTGATCCTCG GTTCCAGAGA CCAGGCCAAG
TCTGAAGAGG CGAGCCGCTG CTGCTATGCC ACGCTCGCCG ACCTGGGTCT TCCCTGTTCA
TGTTCAGGGG TCACCAACCA GGAAGCGGCT GATTTTGGTG ATGTCGTGAT TCTGGCCGTC
CCGTTCAAAC ACCTAAAAGG AACGCTTGAA TCACTTCATG GGCTCGAAGG AAAGATCGTG
GTCAGCCCGG TGAACCCGAT GGAGAAGACG GATCACTTCA TCAATAACCC GCCGCCTGAG
GGGTCTGCGG CCCTGCTGGT TCAGAAGATG CTTCCCGACT CAAAAATTTG CGCTGCATTC
AATGTGATCG CAGCGAACCG ATGGAAGAAG ATCGAGGAAG AATTGAATTA CGCTGTACCG
GTCTGTGGTG ATGACCCGGC CGCCAAGTCG CTTGTGATGG ATCTGGTAAA CGGTGTCTCA
CACCTCAAAG CCTATGATGC GGGACCTCTG ACGAGTTCCA GTCTGATCGA GTGTATCACA
CCGCTTCTTC TTAATATTGC ACGATATAAT AAGATGAAGG ATGTTGGGAT CCAGTTCATC
TGA
|
|---|
| Protein sequence | MAMRLSQKHD VILGSRDQAK SEEASRCCYA TLADLGLPCS CSGVTNQEAA DFGDVVILAV
PFKHLKGTLE SLHGLEGKIV VSPVNPMEKT DHFINNPPPE GSAALLVQKM LPDSKICAAF
NVIAANRWKK IEEELNYAVP VCGDDPAAKS LVMDLVNGVS HLKAYDAGPL TSSSLIECIT
PLLLNIARYN KMKDVGIQFI
|
|---|
| |