| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpal_0994 |
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| Symbol | |
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| ID | 7271727 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosphaerula palustris E1-9c |
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| Kingdom | Archaea |
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| Replicon accession | NC_011832 |
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| Strand | + |
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| Start bp | 1024681 |
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| End bp | 1026603 |
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| Gene Length | 1923 bp |
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| Protein Length | 640 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 643569633 |
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| Product | PAS/PAC sensor signal transduction histidine kinase |
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| Protein accession | YP_002466068 |
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| Protein GI | 219851636 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4251] Bacteriophytochrome (light-regulated signal transduction histidine kinase) |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.620121 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0418978 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTCCTG GAATTGAGAT GTACCTGCTC AGATTATATG TGGCTGGTGA GACTCAGGAA
TCTGCCCGGG CAATCCAGAA CCTTGTGCGT ATCTGTGAGA CATACCTGGT GGGACGGTAC
GACCTGGAGG TGATCGATAT CTCCCGGCAT CCGAGTCTCT CACGGGATGA GCAGATCGTT
GTGACCCCGA CGCTGATCAG GAAGGGGCCG GCTCCTGAGC GGCGACTGAT CGGCGACCTG
TCAGACACCC GGGTGGTCCT TCGGGGTCTT GGTTTACCTG AGGGGGGGCT TCAAAACGAA
CCGAACGATT CAGGATCTTC TGCAAACCCG CAGGTCATAA AACTCTGTGA ACGTTTGCGG
GAGACTGGCG TCGATAGGAT GGATATCTGG ACCGGCCAGG TGGATGGAAT CGTCGTCCCG
ACCTCTGATG AAGACAGGCT ATTCATAAAC CCCGGGGGGG CATCTCCGTA CTGGACCTTT
GTCGAGACGA TGAATGAGGG GGCGGTGGTC ATCGATCGGG CCGGAACGAT TCTGTACTGC
AACCGACGGT TTGCTGCGAT CATCGAGGCG CGTATGGAGA TGATCTCAGG TTCATTCTTC
GATAGTTGGG TATGTTCTCA TGATCACCTC CTCTTTGAAG CACTCTCTGT GGCCGGTGCA
GATCGGCAAT CTTCAGGGGA TCTGCAGATG GTCAATACCC GGGGGCGCCT GGTCCCGGTT
CATCTCTCGC TCAGCCCGTT TACGGGCGGA GGGGTCTCTG AAATTTCTAT CGTGGTGACC
GATCTGACCA CGCGGAAACA TAACTGTGCG TTGCTTCGAT CCGAACATCT GGCCCATTCG
ATCCTCGAAC AGGCCGCCGA CCCGATCGTC GTGATCAACG CTGAAAAGGT GATCATCAGG
GCCAATACCG CGGCAGTGGA GATGGCCGGG ACCAACCCCC TTCTTGCACA GTTTGATTCG
GTCTTTCCAC TCTTCCAGGT GATTGGGGAT GAAGAAATAC CCTTCTCACC GTCCAGAATC
TCCAGTGCCG GCAAGCAGTT ACAGGGGATG GAGGTTCTCT TTCGAAGAAC GGACAGGTCA
CTCTTTTCCT TGCTGATCAG CGCGGCACCG ATAATCGGAG AATTCGGGGA ATCGCCCGGA
TGCGTGGCTG TGATGACCGA TATCACGGCC CAGAAACAGG TCGAAGGGGA ACTTCGAAGG
ACACTCGACG ACCTGGCCCA CTCCAATCAG GACCTGCAGC AGTTTGCGTA CATCGCCTCG
CATGACCTGC AGGAACCACT CAGGATGGTG GCCAGTTACC TGCAGCTCCT CGAGCGAAAG
TATCGGGACC GGCTCGATTC GGACGCCCAG GAGTTCATCG GGTTTGCGGT CGAGGGTGCG
AACCGGATGC AGCAGCAGAT CAACGACCTG CTGGCGTACT CGCGGGTCAC GAGCCGGGGC
CAGCCTCTCA AGCCGGTGAG CGCCGAAGAG GCATTGGCCT CTGCACTGAG TCACCTGGCC
CTGAAGATCG AAGAGACTGG TGCCACGGTC ACCCATGACC CACTTCCGAT GGTCAGGGCC
GATCTCCCGC AGCTGGTTCA GGTCTTTTCG AACCTTCTCG ACAACGCACT CACATTCCTC
CGTCCCCAGG TCGCCCCGGT GATCCATCTC TCGGTGGAAG ATCAGGCTGG CTGGGTGGTC
TTTTCTCTGC ACGACAATGG GATCGGGATC GACCCGGAGT TCTATCAGCG GATCTTTCAG
ATGTTCCAAC GACTTCACTC TCGCGCGGAG TATCCCGGGA CCGGTATCGG GCTTGCGATC
TGCCAGCGAA TTATCGAGCG GCACCATGGG CGGATCTGGG TCACTTCGGT TCCCGGCAGT
GGATCGACCT TCTCCTTTAC GATCCCTGGT GTTAATGGTC ACCTTCATGG TCCTGATCGC
TGA
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| Protein sequence | MAPGIEMYLL RLYVAGETQE SARAIQNLVR ICETYLVGRY DLEVIDISRH PSLSRDEQIV
VTPTLIRKGP APERRLIGDL SDTRVVLRGL GLPEGGLQNE PNDSGSSANP QVIKLCERLR
ETGVDRMDIW TGQVDGIVVP TSDEDRLFIN PGGASPYWTF VETMNEGAVV IDRAGTILYC
NRRFAAIIEA RMEMISGSFF DSWVCSHDHL LFEALSVAGA DRQSSGDLQM VNTRGRLVPV
HLSLSPFTGG GVSEISIVVT DLTTRKHNCA LLRSEHLAHS ILEQAADPIV VINAEKVIIR
ANTAAVEMAG TNPLLAQFDS VFPLFQVIGD EEIPFSPSRI SSAGKQLQGM EVLFRRTDRS
LFSLLISAAP IIGEFGESPG CVAVMTDITA QKQVEGELRR TLDDLAHSNQ DLQQFAYIAS
HDLQEPLRMV ASYLQLLERK YRDRLDSDAQ EFIGFAVEGA NRMQQQINDL LAYSRVTSRG
QPLKPVSAEE ALASALSHLA LKIEETGATV THDPLPMVRA DLPQLVQVFS NLLDNALTFL
RPQVAPVIHL SVEDQAGWVV FSLHDNGIGI DPEFYQRIFQ MFQRLHSRAE YPGTGIGLAI
CQRIIERHHG RIWVTSVPGS GSTFSFTIPG VNGHLHGPDR
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