| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpal_0982 |
|---|
| Symbol | |
|---|
| ID | 7271714 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanosphaerula palustris E1-9c |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_011832 |
|---|
| Strand | + |
|---|
| Start bp | 1011169 |
|---|
| End bp | 1011507 |
|---|
| Gene Length | 339 bp |
|---|
| Protein Length | 112 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 643569620 |
|---|
| Product | protein of unknown function UPF0060 |
|---|
| Protein accession | YP_002466056 |
|---|
| Protein GI | 219851624 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1742] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.236233 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.293859 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTCTTTC AGTCGCTTCT GTTATTTCTC GTCGCTGGGG TATGTGAAAT TGGGGGAGGG
TACCTGATCT GGCTCTGTCT GCGGGAGGGC AGGGGCATTG AATATGCGGT GCTCGGTGCG
ATCATACTCG TGCTCTATGG GATCATTCCG ACATTGCAGG CCTCAAATTT CGGGAGAATA
TATGCAGCAT ATGGAGGAAT TTTTATCGCA CTTGCACTGC TCTGGGGGTG GCAGATCGAT
CACGTCGTAC CGGATCGGTT TGACATCATC GGCGCCGCAG TCGCTCTGAT CGGTGTCTTC
ATCATTATGT ACTGGCCACG GACTGCAGCC ATCGTTTGA
|
|---|
| Protein sequence | MVFQSLLLFL VAGVCEIGGG YLIWLCLREG RGIEYAVLGA IILVLYGIIP TLQASNFGRI
YAAYGGIFIA LALLWGWQID HVVPDRFDII GAAVALIGVF IIMYWPRTAA IV
|
|---|
| |