| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpal_0963 |
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| Symbol | rnhB |
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| ID | 7272371 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosphaerula palustris E1-9c |
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| Kingdom | Archaea |
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| Replicon accession | NC_011832 |
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| Strand | + |
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| Start bp | 993995 |
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| End bp | 994654 |
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| Gene Length | 660 bp |
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| Protein Length | 219 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 643569602 |
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| Product | ribonuclease HII |
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| Protein accession | YP_002466038 |
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| Protein GI | 219851606 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0164] Ribonuclease HII |
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| TIGRFAM ID | [TIGR00729] ribonuclease H, mammalian HI/archaeal HII subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.647368 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCTGATGC CGCTGATCTG TGGGGTCGAC GAGGCCGGAA AAGGGGCCGT GCTCGGACCG
ATGGTGGTGG CCGGGGTCGC CAGCAGGGAT GTCTCCGCTG TCGCAGCACT GGGTGTCAGG
GACTCCAAGC AGTTGACCCG ACTCAAACGG GAGGACCTCT ATGATCAGAT CAGATCGATC
TGCACCACCA CCGTCACCGT CCTCTCTGCT GCAGATATCG ATCTGGCCCG TGAATCGGCG
ACGATGAACA TGATCGTGGC CAGGGGGCAT GCCGCTGTGA TCAGCACTCT GACCCCCACG
CTCGCCTATG TCGACGCCTG TGACGTAAAT GCTGATCGGT ACCGGGAGAC GGTGACGGCC
CTCCTCGAGC CGGCTGCTTC CTGTCAGGTG ATCGCCGAGC ACCGGGCGGA CAGCACCTAT
CCGATCGTGG CCGCGGCCAG CATCATTGCC AAGGTCACCC GTGACCGCCT CGTCGATGCC
CTGGCAGATG AGTGCGGTCA GATCGGGAGC GGGTATCCAT CGGATCGGTA CACCATTGCG
TATCTATCTG ATTATATCAG GCGCCATCAT GCGCCACCTG CCTGTGCCAG AAAAAGTTGG
AAAACGACCA TTCATCTGCT CGAAGAGCGT GCGCAGCGTG ATATTCGCTC ATATTTATGA
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| Protein sequence | MLMPLICGVD EAGKGAVLGP MVVAGVASRD VSAVAALGVR DSKQLTRLKR EDLYDQIRSI
CTTTVTVLSA ADIDLARESA TMNMIVARGH AAVISTLTPT LAYVDACDVN ADRYRETVTA
LLEPAASCQV IAEHRADSTY PIVAAASIIA KVTRDRLVDA LADECGQIGS GYPSDRYTIA
YLSDYIRRHH APPACARKSW KTTIHLLEER AQRDIRSYL
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