| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpal_0962 |
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| Symbol | |
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| ID | 7272370 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosphaerula palustris E1-9c |
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| Kingdom | Archaea |
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| Replicon accession | NC_011832 |
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| Strand | + |
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| Start bp | 992764 |
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| End bp | 993963 |
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| Gene Length | 1200 bp |
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| Protein Length | 399 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 643569601 |
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| Product | geranylgeranyl reductase |
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| Protein accession | YP_002466037 |
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| Protein GI | 219851605 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0644] Dehydrogenases (flavoproteins) |
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| TIGRFAM ID | [TIGR02032] geranylgeranyl reductase family |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.493163 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGACAG AGTATGATAT CCTGATCATC GGGGCCGGTC CTGGTGGGGC TATGGCTGCG
AAGACCGCAG CAGAAGAGGG GCTCTCGGTT CTTATGGTCG AGAAGCGGCC CGCGATCGGT
ACGCCGGTCA GATGTGCTGA GGGTGTCGGG AAGGAACTGC TCCATGAATT CATCGGGCCT
GATCCCGCCT GGATCTCTGC AGATATCGAG CGAGCCACGA TTGTCGGCCC GGATGGTACC
TCGATGTCCC TTGAGGCACA GAGGGCCGGC AACGAGGTCG GGTATATCCT GGACCGGAAG
GTCTTCGATC GTGCACTGGT CTGGCAGGCG GCCGAGGCCG GCGCCGAGGT ACAGGTGAAG
ACCCGGGCGA TCGCACCGAT CCTTGAGAAC GGTTTTGTCA GGGGAGCACG GCTGCAGGGG
TATGGCACGA CGACCGATGT CCGGGCCAAG GTCGTGATCG CGGCGGACGG AGTCGAGTCC
AAGTTTGCCC GGTGGTGCGG TGTGGACACC GCGGTTCCAG TGAATGAGAT TGAGACCTGT
GCCCAGTACC TGCTGACCGA TATCGATATC GATGAGTCGG CGACGGTCTT TTACCTGGGG
AACGAGATCG CTCCCGAGGG CTATGCCTGG GTCTTCCCGA AGGGGAAGCG GACGGCGAAT
GTCGGGCTCG GAATCAGCGG GAAGAAGAAT CTGCCCGGCA ACCGACCGAT CGACTATCTG
AACCGGTTCG TCGAAAAGAA CTTCCCGAAC GGGAAGACGA TCGAGTGTAT CGTCGGCGGT
GTTTCGGTCT GCACGCCGCT GGCCTCCACG GTCAGCGACG GTCTGATGAT CGTCGGTGAT
GCGGCCAGGA TCAGCGATCC GCTGACGGGT GGCGGCATCT ACAACGCCAT GTACTCGGGG
AGGCTCGCAG CCCAGGTCGC GATTGAGTGT ATCAAACGCG GCGACTGCAG CCGGGCAGCA
CTGGCTGCCT ATGACCAGCA GTGGCGTGTG TCGGCGATGG GGAAGGCCCT GGACCGCAAC
TACAAGATCA AGGAGTACTT CATCAGACAG AGCGATGAGA AACTGAACGC ACTGGCCCAT
TCGTTCAAGA AGATCAATAT GGAGAAGTTC TCAACGCTCG AATTGATCAA GGAACTGATC
AAACATAATC CAAAACTCCT CTTTGAACTG AAGACGCTGC GGGACTCACT CAACTCCTGA
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| Protein sequence | MKTEYDILII GAGPGGAMAA KTAAEEGLSV LMVEKRPAIG TPVRCAEGVG KELLHEFIGP
DPAWISADIE RATIVGPDGT SMSLEAQRAG NEVGYILDRK VFDRALVWQA AEAGAEVQVK
TRAIAPILEN GFVRGARLQG YGTTTDVRAK VVIAADGVES KFARWCGVDT AVPVNEIETC
AQYLLTDIDI DESATVFYLG NEIAPEGYAW VFPKGKRTAN VGLGISGKKN LPGNRPIDYL
NRFVEKNFPN GKTIECIVGG VSVCTPLAST VSDGLMIVGD AARISDPLTG GGIYNAMYSG
RLAAQVAIEC IKRGDCSRAA LAAYDQQWRV SAMGKALDRN YKIKEYFIRQ SDEKLNALAH
SFKKINMEKF STLELIKELI KHNPKLLFEL KTLRDSLNS
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