Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mpal_0954 |
Symbol | |
ID | 7272447 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosphaerula palustris E1-9c |
Kingdom | Archaea |
Replicon accession | NC_011832 |
Strand | + |
Start bp | 988577 |
End bp | 989215 |
Gene Length | 639 bp |
Protein Length | 212 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 643569593 |
Product | hypothetical protein |
Protein accession | YP_002466029 |
Protein GI | 219851597 |
COG category | [S] Function unknown |
COG ID | [COG1711] Uncharacterized protein conserved in archaea |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.830769 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAACTGG AACTGGATGA GCTGCGCATA ATTCTGCTTA AAGAACGGGA AAGCGGGAAA CTGACCCAGA TCCCGCCTGA CCTCTATCAG AACGCCTCGG CGTCTCTGGC AGCGCTGATC AAGACTCTGT ATGCCAGTGA GGACCGGTTC TTCTCTGTCC AGGCACAGTT GACGATGGAG GAGGTCAACA GCATTCGTGA GACGATACAG GACATCTTCC GGATGCGTGC TGAAAAGATC CTTCTCCTCG CGAATGCCGA GGCTGAGGGG GAGACGGCTG CTCGCGATGA GGTGAAGAAG ATGCTCGTCT CTGAACGGCA GATGTATCGG GAGATCACCG AGTCCGTACA GGCCTGCAGG CGGGAACTGC TCGACGCCGC CAGCGACCCT GAGACCTTGG CATCCGGGCA TTCCGGGATT GATGCGATGA CCGAAGAAGG TCCCGGTTCT CTCTCCGGGG TGGCCGAAGA TCGGCCATCC CTGGTGCTGG CGCGGATACT CGAGGATGTC GAGCCGTTTA TGGCGGTTGA TGGGAGGGTT TATAACCTCC TAAAAGAAGA TCTGGTGACA CTTCCTGAAC AGAACGCAGA GGTTCTGCGC GAACGCAACA TACTCTTAAG TATCGGGCTT CACAAATAA
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Protein sequence | MELELDELRI ILLKERESGK LTQIPPDLYQ NASASLAALI KTLYASEDRF FSVQAQLTME EVNSIRETIQ DIFRMRAEKI LLLANAEAEG ETAARDEVKK MLVSERQMYR EITESVQACR RELLDAASDP ETLASGHSGI DAMTEEGPGS LSGVAEDRPS LVLARILEDV EPFMAVDGRV YNLLKEDLVT LPEQNAEVLR ERNILLSIGL HK
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