Gene Mpal_0953 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpal_0953 
Symbol 
ID7272446 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosphaerula palustris E1-9c 
KingdomArchaea 
Replicon accessionNC_011832 
Strand
Start bp987440 
End bp988576 
Gene Length1137 bp 
Protein Length378 aa 
Translation table11 
GC content60% 
IMG OID643569592 
ProductDNA primase, small subunit 
Protein accessionYP_002466028 
Protein GI219851596 
COG category[L] Replication, recombination and repair 
COG ID[COG1467] Eukaryotic-type DNA primase, catalytic (small) subunit 
TIGRFAM ID[TIGR00335] DNA primase, eukaryotic-type, small subunit, putative 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGACCAG CCACCCTTGA GTTCATCAAA CAGCAGTTCA CCGGTTATTA TCAGCGGGTC 
TACCCGGTCA CCCCTGATGC ACTGCTGCAG CGGGAGTGGG GTTTCATCTT CTTTGATGCT
GGCCGCGAGG TTCGGATGCG CAGGCATCTG GCCTTTGGGG AACGGCAGGA ACTCACCGAA
TATCTGAAGA CGATGGTTCC TGCGCATGTC TTCTACTCGT CGGCATACTA CGAGTCTCCC
GGCGCGCCGA CGATGGCGGA GAAGGGATGG TCGGGGGCCG ACCTGATCTT CGATCTCGAT
GCAGATCATA TCATGCACGG TTCGTACCAG GCGATGCTGG CACGGGTCAA GGAGGAGGTG
CAGAAGCTGC TGGCCGTCCT GACCGACGAA CTGGGGTTTT CGGAGAAGTA CTGCGAGGTG
GTCTTCTCCG GCGGGCGCGG GTACCATATC CATGTGAACG ACCTGGCGGT TCGTTCCTGG
GGGAGTGCCG AACGGCGCGA GGTGGTCAAC TATGTCTGCG GGATCGGTCT CGATCCCGGA
CTGCTGATCC GCGCTGGGAC CGATCTGTCG ACAGGCTGGC CCCGGCGGTA CCTGGGCGCG
CTGGACGGAT ATCTCGCCTG GTTGAAGGTA AAGAACCAGA AGGATGCCCT GCTCCATCTT
TCGTCGATAA AGGGGGTTTC GCGAAGTTCT GCGGCAGGAT TGCTCAAGTC CCTCGATCAG
GTTCGTGCCA CCATCGGGGG TGATCATCCG GAGAAGGTAC TGGGCGACCG TGTCCTTCGG
GCGGTCACGA CGAATGATAA CCCCGATTGG AAGAAGCGGT TGCAGGAGAC CGGGGTGCAG
GCCGATGAGC CGGTCACCAC CGATATCAAG CGGCTGATCC GGATGCCGAC CTCGCTCCAT
GGCGGGAGTG GTCTTCGGGT CGTTCCGCTC ACCATCAGCG AAGTCCAGGA GTTCGATCCC
CTGATCGATG CGGTCGTCTT TGGGGATCGG GACGTGCAGG TCACCGCTGA GAAGACGTTG
ACGGTGTCAC TGCTGGGAAA TACGTACGAG GTCAGTGCCG GTACACAGAC GGTTCCTGAG
GCCGTTGCCG TCTTCCTCTG CTGCAGAGGA CTGGCCGAGA TTGCAGAGGG GAGATAG
 
Protein sequence
MRPATLEFIK QQFTGYYQRV YPVTPDALLQ REWGFIFFDA GREVRMRRHL AFGERQELTE 
YLKTMVPAHV FYSSAYYESP GAPTMAEKGW SGADLIFDLD ADHIMHGSYQ AMLARVKEEV
QKLLAVLTDE LGFSEKYCEV VFSGGRGYHI HVNDLAVRSW GSAERREVVN YVCGIGLDPG
LLIRAGTDLS TGWPRRYLGA LDGYLAWLKV KNQKDALLHL SSIKGVSRSS AAGLLKSLDQ
VRATIGGDHP EKVLGDRVLR AVTTNDNPDW KKRLQETGVQ ADEPVTTDIK RLIRMPTSLH
GGSGLRVVPL TISEVQEFDP LIDAVVFGDR DVQVTAEKTL TVSLLGNTYE VSAGTQTVPE
AVAVFLCCRG LAEIAEGR