| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpal_0937 |
|---|
| Symbol | |
|---|
| ID | 7272430 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanosphaerula palustris E1-9c |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_011832 |
|---|
| Strand | - |
|---|
| Start bp | 972333 |
|---|
| End bp | 973571 |
|---|
| Gene Length | 1239 bp |
|---|
| Protein Length | 412 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 643569576 |
|---|
| Product | proteasome-activating nucleotidase |
|---|
| Protein accession | YP_002466012 |
|---|
| Protein GI | 219851580 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG1222] ATP-dependent 26S proteasome regulatory subunit |
|---|
| TIGRFAM ID | [TIGR01242] 26S proteasome subunit P45 family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.274692 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.480518 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCGACA CCCTGAATCA TTTACCTGAA CCTCAAAAAG GGGAGGATCT CTATCGGTAC
CTCCTCGAAA GGGTGACAAA CCTGGAGGAT CGGAATACGG AACTCCGGGA ACAGCTCCGT
CAGATCGAAG CTGATAAGCG CTATCTTGAA ACCCAGAAGG TACGATACGA ACGCGAGGTG
CGGAAGTTCA AGGGGGAGAT CGAGCAGATG AAGTCCCCGC CCCTCGTGAT CGGGACGGTC
ACCGACCTGA TCGATGAGAA CAGGGTGATC GTCAGATCGA GCGCTGGCCC ACGATTTCTG
GTCGGGATAT CGCAGAGTCT CAATATCGAA GAGATCAAAC CAGGGGCCCG CTGCACCTTA
AACCAGCAGT CGCTTGCGAT CGTCGAGATA CTCCCAACCA ACTATGATGC ACAGATTTAC
GGGATGGAGG TGATCGAAGC GCCTTCCGAA CGCTATGAGG AGATCGGTGG GCTTGAGAAG
CAGATAAACG AGATTCGGGA GGCTGTCGAG TTACCCCTGA AGAAGCCGGA GGTCTTCCGG
AAGATGGGGA TCGAGCCGCC GAAGGGGGTA CTCCTCCATG GGCCGCCCGG AACCGGGAAA
ACTCTGCTGG CTCGGGCTGT CGCTCACCAG ACCGAGGCAC ACTTTCTCCG GGTGGTCGGG
TCTGAACTGG TGCAGAAGTA CATCGGCGAG GGGGCCCGGT TGGTCAGGGA GCTCTTCGAA
CTGGCCAAGA AGAAGAGCCC CTCCATCATC TTCATCGATG AGATCGATGC CATCGGAGCT
TCCAGGACCG AGTCGAACAC CTCCGGAGAC CGCGAGGTGC ATCGGACCCT GATGCAGTTG
CTGGCCGAGA TGGACGGGTT CAGCAACCGT GGGGATGTCC GGATCATCGG GGCCACAAAC
CGGATCGATA TCCTCGACCG CGCCCTCCTT CGGCCGGGAC GGTTCGATCG GATCATCGAG
ATCCCGGCTC CAGATATCGA AGGAAGGGTC TCGATCCTGA ATATCCACTG TGCCGGGATG
AACATCGACA AAAAAGTCGA CATCAGAGAT ATCGCCACAC GGACCGATGG AAAAAACGGG
GCAGATCTGC GTTCTATCTG CATGGAAGCA GGGATGTTCG CGATCAGATC GGACCATGAG
ATGGTGACAC TGGAGGATTT TGAACAATCG ATCGAAAAAT TCTCCAACGA CTTTGAACGG
GACTCCCTGA TCAATACGTC AGGGGCCATG TTTGCATGA
|
|---|
| Protein sequence | MADTLNHLPE PQKGEDLYRY LLERVTNLED RNTELREQLR QIEADKRYLE TQKVRYEREV
RKFKGEIEQM KSPPLVIGTV TDLIDENRVI VRSSAGPRFL VGISQSLNIE EIKPGARCTL
NQQSLAIVEI LPTNYDAQIY GMEVIEAPSE RYEEIGGLEK QINEIREAVE LPLKKPEVFR
KMGIEPPKGV LLHGPPGTGK TLLARAVAHQ TEAHFLRVVG SELVQKYIGE GARLVRELFE
LAKKKSPSII FIDEIDAIGA SRTESNTSGD REVHRTLMQL LAEMDGFSNR GDVRIIGATN
RIDILDRALL RPGRFDRIIE IPAPDIEGRV SILNIHCAGM NIDKKVDIRD IATRTDGKNG
ADLRSICMEA GMFAIRSDHE MVTLEDFEQS IEKFSNDFER DSLINTSGAM FA
|
|---|
| |