| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpal_0935 |
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| Symbol | |
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| ID | 7272428 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosphaerula palustris E1-9c |
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| Kingdom | Archaea |
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| Replicon accession | NC_011832 |
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| Strand | - |
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| Start bp | 968023 |
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| End bp | 970647 |
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| Gene Length | 2625 bp |
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| Protein Length | 874 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 643569574 |
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| Product | DNA mismatch repair protein MutS |
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| Protein accession | YP_002466010 |
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| Protein GI | 219851578 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0249] Mismatch repair ATPase (MutS family) |
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| TIGRFAM ID | [TIGR01070] DNA mismatch repair protein MutS |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.547997 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGGGG GGTTGAGTCC AGGAATGAGG CAGTATCAGG CTGCAAAGCA ACAGTATCCC
GATGCTCTGC TCCTCTTTCG GATGGGCGAC TTTTACGAGA CGTTCGGTGC GGACGCAGAG
ATCGTCGCAC GCGAACTGGA TATTGTACTG ACTTCGCGAT CATCAGACAG CGCAGGTAAG
AAGATTCCGC TCGCAGGGGT TCCTTATCAT GCTGCGGACG GGTACATCGC CCGGCTGGTC
AGGCGGGGAT ACAAGGTCGC CGTCGGGGAG CAGGTCGAGG ATCCCAAGAA GGCGAAAGGG
CTGGTCAGGC GCGAGGTGGT CAGGGTGATC ACGCCGGGAA CGGTGATCGA GTCGGAGCTG
CTCGGGTCGG CCGAGGCCAG AACGCTGGTG GCGGTCGCCC TGGACCGGCG GACAGACCAG
ATCGGGGTGG CCTCGCTGGA CGTCTCGACC GGGGCCTTCT CGGTTCTGGT CACCAGGTCC
GGGTCCGACT GCTCGGGTCT CCGGACCGAA CTGGCCAGGA TCGGCCCGAC CGAGGTGATC
GTTCCGGCTT CGGCAGACCC GGATCTGATC GCCGCGGCCA GGGAGATCTG CCCGGTGGTA
ACCCCGTATC CGGACGAGTC CTTCGCACCC GGCACCGCCA ACGAACTGCT GAAGCATCAC
TTCCAGACCG CCACCCTCGA AGGGTTCGGC TGTGCCGGCC TTCCCCTGGC CATCGGGGCG
GCCGGGGCGG CGCTCGCCTA TGCCCTAGAG ATGCATCACG CCCCGCTGAC GCATATCACG
ACCCTCTCGA CACGGACCGC GGAAGAGCGG ATGGTGCTGG ACGAGATCAC GCTCAGGAAC
CTGGAGCTGG TCTCGACGAT CCGGGGCGAG GCGAAGGACG GAACACTCCT CAGTGTGCTC
GACCGGACCG GCACCTCGAT GGGGGCACGG CTGCTCAAGT CCTGTCTGGT CAGCCCGCTG
CTCAACCGCG AGCAGATCGA GGAGCGGCTC GATGCGGTCT CGTTCTTCGT CGACCACCCG
ATGGTCCGCT CCGAGGTCAG GAGTCTGCTT CACCGCTCTG CAGACATCGA ACGGATCGCC
GGCAGGATCG CCTACGGGAG TGCGACCCCG CGGGACCTGG TCACCCTGAA CCGCTCGCTG
ACCGTCCTCC CGATGATCAG TTCCCTGCTC AGCGACCCGG AGGTGACGGT CCCTGCCGAG
GTGGCCACGG CCGTCGCCGG CATCGAGGAC CCCGGGTCGA TCACGGACCT GATCGAGCGG
GCCCTCGTCG ACGACCCGCC GGCGAACACC AGGAACGGGG GGATGATCCG GGACGGCTAC
GACGAGACCC TCGACCACTT CCGGTCTCTC TCGGGGTCGG GGAAGGACTG GATCCTCGAC
CTGCAGCAGA AGGAGCGGGA ACGGACCGGG ATCCGGACGC TGAAGATCGC CTACAACCGG
GTCTTCGGCT ACTACATCGA GGTCACCAAG GCGAACGCCG CGCTGGTTCC GGCCGAGTAC
GACCGGAAAC AGACGACGAC CAACGGCGAG CGCTACACCA CCCCGGCCCT CAGGGAGCAG
GAGCAGCAGA TCGCCGAGGC CGAAGAGCAC CTGCTGGAAC GGGAGACGAT GCTCTTTGCA
GCACTGCTGA CCTCTCTGGC CGGCTCGGTC CCGATGCTCC AGCAGAACGC CGCATCGGTG
GCCTGGCTGG ACCTCTATTC GGCCCTCGCC GAGGTCGCGG TCCAGGACGG GTTCACCCGT
CCGGTGATCA TCGACGAACC GAAGGTGCTG ATCCGGGGCG GGCGGCACCC GGTCGTCGAG
CAGCATGTCG AGGGCGGGTT CATCCCGAAC GACACCAGCA TGGACGGAGC GGAGGAGCAG
ATCCTGATCA TCACCGGTGC CAACATGGCC GGCAAGTCCA CATATATGCG GTCGCTCGCC
ATCCTCTGCA TCATGGCGCA GATGGGCAGT TTCGTCCCGG CCGACCATGC GACGATCGGG
CTGGTCGACC GGGTCTTCAC CCGGGTCGGG GCGTTCGACG ACCTGGCCCG CGGGCAGTCC
ACCTTCATGG TCGAGATGGT CGAACTGGCC AACATCTTAA ACCACGTGAC CCCGCAGAGC
CTGGTGATCC TGGACGAGAT CGGTCGCGGG ACATCGACAG TGGACGGATA CAGCATCGCC
CGGGCCGTCC TCGAGTTCCT GCACGGCAAG GGAAAGAGCG GGCCGCGGAC CCTCTTCGCG
ACCCATTTCC ACGAGCTGGT CGACGTCGAG GCGACCTTAA AGCGGGTTCG GAACTATCAC
CTGGCCGTGC AGGAGACCGG GACCGACGTG ATCTTCACCA GGCAGCTGAT CCCCGGGGCG
ACCGACAAGA GTTATGGTAT CCATGTCGCC ACCCTGGCCG GGGTGCCGAG GAAGGTGACC
GACCGGGCGA CCGCCATCCT GGCCGAGGTG ATGGGAAGGG AGTACAGCAC GACCCCGAAG
AAGGCCCGGT ATACGCAGAT GCTGTTGATC AGCCCCGAAT CCGAGGCGGT CGAGCACCCG
GCCGTCAAGG CCCTCCGGGG GATCAACCCG GACGACCTCA CGCCATTGCA GGCCCTGCAG
GCGCTCTACG CCCTGAAAGA GCATCTCCGA GGGGGCGGGG TATGA
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| Protein sequence | MTGGLSPGMR QYQAAKQQYP DALLLFRMGD FYETFGADAE IVARELDIVL TSRSSDSAGK
KIPLAGVPYH AADGYIARLV RRGYKVAVGE QVEDPKKAKG LVRREVVRVI TPGTVIESEL
LGSAEARTLV AVALDRRTDQ IGVASLDVST GAFSVLVTRS GSDCSGLRTE LARIGPTEVI
VPASADPDLI AAAREICPVV TPYPDESFAP GTANELLKHH FQTATLEGFG CAGLPLAIGA
AGAALAYALE MHHAPLTHIT TLSTRTAEER MVLDEITLRN LELVSTIRGE AKDGTLLSVL
DRTGTSMGAR LLKSCLVSPL LNREQIEERL DAVSFFVDHP MVRSEVRSLL HRSADIERIA
GRIAYGSATP RDLVTLNRSL TVLPMISSLL SDPEVTVPAE VATAVAGIED PGSITDLIER
ALVDDPPANT RNGGMIRDGY DETLDHFRSL SGSGKDWILD LQQKERERTG IRTLKIAYNR
VFGYYIEVTK ANAALVPAEY DRKQTTTNGE RYTTPALREQ EQQIAEAEEH LLERETMLFA
ALLTSLAGSV PMLQQNAASV AWLDLYSALA EVAVQDGFTR PVIIDEPKVL IRGGRHPVVE
QHVEGGFIPN DTSMDGAEEQ ILIITGANMA GKSTYMRSLA ILCIMAQMGS FVPADHATIG
LVDRVFTRVG AFDDLARGQS TFMVEMVELA NILNHVTPQS LVILDEIGRG TSTVDGYSIA
RAVLEFLHGK GKSGPRTLFA THFHELVDVE ATLKRVRNYH LAVQETGTDV IFTRQLIPGA
TDKSYGIHVA TLAGVPRKVT DRATAILAEV MGREYSTTPK KARYTQMLLI SPESEAVEHP
AVKALRGINP DDLTPLQALQ ALYALKEHLR GGGV
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