| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpal_0911 |
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| Symbol | |
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| ID | 7272404 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosphaerula palustris E1-9c |
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| Kingdom | Archaea |
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| Replicon accession | NC_011832 |
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| Strand | + |
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| Start bp | 940666 |
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| End bp | 942168 |
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| Gene Length | 1503 bp |
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| Protein Length | 500 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 643569552 |
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| Product | putative transcriptional regulator |
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| Protein accession | YP_002465988 |
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| Protein GI | 219851556 |
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| COG category | [K] Transcription |
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| COG ID | [COG2865] Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0980793 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.225317 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTATGA AAACAACCTC TGCCAAGAGA ATGACAACAA TTGGAATATT TGTCAGTAGT
GTGCAAAAGG AATTGAATGA GGAGAGGATA GCAGTTCGTG ATTATATTAA TACGAACCCG
CTTCTCAGGC TATATTTTGA CACATTTCTC TTTGAAGATC TCCCAGCACG TGATTGTAAA
CCGGACGAAT TATATTTGGA TGAAGTCGAT GGATGCTCGA TATATCTGGG GATTTTTGGT
AATGAATATG GCTTGGAGAA CAACCAGGGT GTTTCTCCTA CAGAACTTGA ATTTGAACGG
GCAACAGAGA AAAGTAAATA CCGGTTAATT TTTGTTAAGG GGAAGGATGA TGTCGAGCGT
CATCCGAAGA TGCAGAATCT CATCAACCGG GCAACACCTC ATGTTGTGCG AAAACGTTTC
ATCAATACAG ATGAATTGAA AGAAGAATTG TTTAATGCAT TAGTTCAATT TCTGTGTGAC
AGCAAAATAA TCCCCAGTAC ACCATTCGAT GAATCCGCCT GCCCCGGATC GACATTAAAG
GATCTATCCT ATGAAATAAT TGAGTGGTTC GTCGCCGTTG CAAGAAAAGA ACGGCATTTC
CCTCTCCAGA TAGATACTCC TCCAGAATTG GTTCTGCGAC ATCTCGAACT GCTCGATGGG
ACACAACCGA CCAATGCAGC GGTTCTCCTC TTTGGGTCAA ATCCCCAAAA ATTTTTGCAA
ACTGCAGAAG TCAAATGCCT TCATCTTCAT GGTTCGGTTA TCGCAAAGCC AATTCCTTCG
CATCAGGTTT TCACTGGAAC TGTTTTCGAA CAGGTTGACA AAGCAACCGA TTTCGTTCTT
TCAAAACTAA ATCGTTTTGT CCCGGCCCGT GATGAGGCCC CGGCCAGTGA AACCAGTTAC
GAGATTCCCA AAGAAGTAAT CAATGAAGCC ATTGTCAATG CCATCGCTCA CCGGGATTAT
ACATCTTCGG CGAGCATTCA GGTCTATGTT TTTTCTGATC GTATCGAGAT CAGAAATCCT
GGCGAGCTTC CTCCGGACCT AACCTTTGAA AACCTGAAAA TAACTCATAA CTCCAGGCCC
CGTAATCTCC GGATTGCGAA TGCATTATTT CTCTCGCACT ATATCGAAAA AATCGGATAC
GGAACTCTCC AGATGATTGC TGGATGTAAG GGCGCTGGTT TGCCGGCGCC GGATTTTTCT
CAAAGTGGTA GCGATTTTGT TGTTACGCTC TGGCGCGACT GGCTGACTGA TGAGGTTATG
ACAAAGCTGG GGATCACTAC CCGACAAAGA ATTGCTATTC AATTAGCGAA AGATTCAGGA
CGTGTGAACA GTACTGATTA TTCGAACCGT GCGGAGATTT CACGACAGAC TGCAGTGCGT
GACTTGAAGG ATCTCATTGG TAAAGGTATC CTTGAAAAGA AAGGAGTAAC CGGAAAGGGT
ACTTATTACT CATTGTGCAA AGGACTGAGA AAGGCACCAT ACGATTCAGA ATCCGGAGAA
TGA
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| Protein sequence | MTMKTTSAKR MTTIGIFVSS VQKELNEERI AVRDYINTNP LLRLYFDTFL FEDLPARDCK
PDELYLDEVD GCSIYLGIFG NEYGLENNQG VSPTELEFER ATEKSKYRLI FVKGKDDVER
HPKMQNLINR ATPHVVRKRF INTDELKEEL FNALVQFLCD SKIIPSTPFD ESACPGSTLK
DLSYEIIEWF VAVARKERHF PLQIDTPPEL VLRHLELLDG TQPTNAAVLL FGSNPQKFLQ
TAEVKCLHLH GSVIAKPIPS HQVFTGTVFE QVDKATDFVL SKLNRFVPAR DEAPASETSY
EIPKEVINEA IVNAIAHRDY TSSASIQVYV FSDRIEIRNP GELPPDLTFE NLKITHNSRP
RNLRIANALF LSHYIEKIGY GTLQMIAGCK GAGLPAPDFS QSGSDFVVTL WRDWLTDEVM
TKLGITTRQR IAIQLAKDSG RVNSTDYSNR AEISRQTAVR DLKDLIGKGI LEKKGVTGKG
TYYSLCKGLR KAPYDSESGE
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