| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpal_0908 |
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| Symbol | |
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| ID | 7272401 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosphaerula palustris E1-9c |
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| Kingdom | Archaea |
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| Replicon accession | NC_011832 |
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| Strand | - |
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| Start bp | 935430 |
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| End bp | 939233 |
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| Gene Length | 3804 bp |
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| Protein Length | 1267 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 643569549 |
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| Product | multi-sensor signal transduction histidine kinase |
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| Protein accession | YP_002465985 |
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| Protein GI | 219851553 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4251] Bacteriophytochrome (light-regulated signal transduction histidine kinase) |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.142245 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.539943 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTGAGG AACTGCAGGC GAACAATGAT CAATTGCTCG CCAATGAGAG AGCGCTCCTG
GAGAGCCTAG AGCGGAACAC GTTCCTTTCA GATATCCTCG ACAGATCGTC CCAGCCGTTT
GGGGTCGGAT ACCTGGACGG GAGACTCGGG ATCGTCAACC ATGCATTCGA GGAGCTGACC
GGCTATACAG CAGACGAACT GCAGAAAATG GACTGGACGG CAACGCTGAC CCCTCCGGAA
TGGTTGGATG TTGAGAGGAA AAATCTTGAA GAACTCCACC GCACAGGCAA ACCAGTCCGG
TACGAGAAGG AGTATATCAA AAAAGACGGC ACACGGGTCG CCATTGAACT CCTCGTTCAC
CTCGTCACAG ACAAAGAGGG AAACCCCCAG TATTACTACT CCTTCATCAC CGATATCACC
GAGCAGAAGC GTAACCGCGA GATCCTCTCC CTCTCAAACC GGGTCCTGCA CAGTGCGGAG
GAACACCATA CCCTCCAGCC GCTCCTCGAA GAGTACATTC GCACCCTGCA GGAGTACACC
GGATGCGACT CGATCGGGGT CCGGATCCTC GATGAACAGG GGAACATCCC TTACCTGGCG
TACGCTGGTT TCTCCCGCGA CTTCTACGAA CAGGAGAACC CGCTCTCGGT CAGGACCGAT
CACTGCATCT GTATCAACGT GATCGAAGGC ACGACCGATC CCTCCCTGCC GTTCTACACT
GCCGGCGGGT CGTTCATGAT CAACGCCACA ACAAAATTCC GCGCAACCGA ATCTGATGAG
GAGAAGGAAA AGACCCGAAA CACCTGCACT ATGGTCGGAT ACGAATCGGT CGCGCTCATT
CCGATCCGGA AAGGGGACCA GATCATGGGG CTGCTCCACC TCGCTGATCA CCAGGAGGGG
ATGATATCGG CGGAGAAGGT CAGGGTGCTT GAACAGGTGG CCTATGCCCT CGGTGCCTCG
ATCGTCCGGG TACAGACAGA GGAAGCACTT CGCAAACAGG AGAAGACCGC ACAGGCGATC
CTCGCAGCTG CAAAGGAGTC GATCTGGCTG TTCGGCACCG ATGACACCAT CCTGATGGCG
AATCCGACGG CGTTGGTACG ATTGGGCGGG AAGGACACAG GCGAAGTCAT CGGTCACCAG
TACTCTGAGT TCATGACATC TGAACTGGCT CAGGCACGAA GGGCACGGAT CGAAGAGGTG
ATCAGCTCAC GCCGATCGGT CCAGTTTGAA GATATAAGGG CCGGCACCAT CTTTATCCAC
ACCTTCTGCC CGGTCTTTGA CGAGGCCGGT GCAGTGAGCA GCATTGCTGC CTTCAGCCGG
GACATCACCG GGATCAGGCA GGCTGATGAA GAACTCCTCA AAAAGAACGA GGGTCTCCAT
ATCCTGAACG AGGAACTGAC GGCAACCCAG GAGGAACTGC GCCAGAGCAT CGACGAGCTG
ACGACCATGG AGCATGAACT CAGGGAGACG GGCCAGTACC TCGAAAACCT GATCCAGTAC
GCGAACGCCC CGATCATCGT CTGGGATCCG GCATTCCGGA TCACCCGGTT CAACCACGCG
TTCGAACTGC TGATCGGCAG GAAGGCGGCA GACGTCATCG GCCAACCGCT CGAACTCCTC
TTCCCCAAAA AATTCGCCGA ACCGGTGTTG GAGATCATCA GAAAGACCAC CCGGGGAGAG
AGGATGGAGG TCGTGGAGAT CCCCATTCTC CACCAGAACG GAGAGATCAG AACCGTCCTC
TGGAATTCTG CAGCCATCTT TGGATCTGAC GGAGAGACTG TCCTGTCGAC GATCGCACAG
GGACAGGACA TCACCGAACG GAAGCGAACC GAGGAGGCAC TGCACGAAGC CCACCTCCGC
CTTACCCATC ATATAGAGAA TTCTCCCCTG GCGGTCGTGG AATTTGACGC ACAGTTCCGT
GTTACCCGCT GGTCGGATGA AGCGGAAAAA GTGTTTGGCT GGACCATGGC AGAGGTCATG
GGGAGAACGA TCGACGAAAT CCCCTGGGTA TACGAAGAGG ACGTGGATCG GGTCGCCTCC
ATCTCTGCTG ATATGATGAA CGGAAAGGCC CCGCGGAACA AGCATACCAA CCGCAACTAT
CGAAAGGACG GGGCGGTCAT CACCTGCGAA TGGTACAACT CGGCCCTGCG GGACGAAACA
GGAGAACTCG TTTCGATCCT CTCTCAGGTG CTGGATGTTA CAGAACGGGA TCGTGCTGAG
GCAGACCTGC TCGAGAAGAA CCAGGAACTC AGTGAGCTCA ACGAGGAACT GACGGCAACC
CAGGAGGAAC TGCGCCAGAG CATCGACGAG CTGACGACCA TGGAGCATGA ACTCAGGGAG
ACGGGCCAGT ACCTCGAAAA CCTGATCCAG TACGCGAACG CCCCGATCAT CGTCTGGGAT
CCGGCGTTCC GGATCACCAG GTTCAACCAT GCCTTCGAAC TGCTGATCGG CAGGAAGGCG
GCAGATGTCA TCGGCCAACC GCTCGAACTC CTCTTCCCCA AAAAATTCGC CGAACCGGTG
TTGGAGATCA TCAGAAAGAC CAACGACGGA GAGAGGATGG AGGTCGTGGA GATCCCCATT
CTCCACCAGA ACGGGGAAGT CAGAACCGTC CTCTGGAATT CTGCAGCCAT CTTTGGAGCA
GATGGAGAGA CTGTCCAGTC GACGATTGCA CAGGGACAGG ACATCACCAA AAGGAAATGG
GCAGAGGAGG CGCTGCGCCA GTCGGAAGAG CAGTATCGCA TGCTCTTCAA CACCCTGACC
GAAGGCTTCT GCATCATCGA AATGCTCTTC GATGCAGACG AACGTCCCAT CGATTACCGC
TTCCTGGAGA TCAATCCGGC GTTTGAGAGA CAGACCGGAT TGCATGAGGC CCAGGGGAGA
TTGATGCGTG ATCTTGCTCC GAACCATGAG GAACACTGGT TTGAAATCTA TGGAACGATC
GCATTGACTG GCGAACCGGT CCGATTTGAG AATGAAGCAA AAGCATTGAA TCGCTGGTAT
GAGGTCTCCG CATATCGGGT CGGCGGCCCG GAGAGTCGAA GAGTCGCCAT CCTCTTCAAT
GATATCACCG AGCGCAAGCA GGCCGAAGAG GTCCTCAAGA CCATCGCCGA TAACCTGAAA
GCGAGCAACC AGGAACTGGA ACAGTTTGCG TACATCGCCT CCCATGACCT CAAGGAACCG
CTCAGGATGG TGACCTGTTT CTCACAAATT CTCGAAAGGC AGTATAAAGG ACAACTGGAT
GCAGATGCTG ATGAGTTCAT CGGCTACATT GTCGACGGTG CGCTGCGGAT GGAGGCGTTG
ATCAATGACC TTCTCCTCTA TTCCCGTATC AATCAGGGGA TGCGACCGGT CGAGCGGGTT
GATATGAAGC ATGCAATCGA AGAAGCCATA TCAAACCTCA TCATTCCCAT CCGTGAACGT
AATGCCAGGA TCACTCGGGG AGCGATGCCA TCGATACAGG GGGACCTCTC CCAGATGGTC
CAACTGTTCC AGAACCTGAT CGGAAATGCG ATGAAGTACT GCCCGGAGGA GAGGGAGCCG
GAGATCTGGA TCAATGCCGA GCGTACCGGA AAGGGCTGGA CCTTTTCAGT GAAGGACAAC
GGGCTCGGGA TTGATCCTGC ATATCACGAG CAGATCTTCA TGATCTTCAG ACGGCTCCAC
ACCAAGGCAG AATACCCTGG CACCGGGATC GGCCTCGCGG TCGTCAAGCG GATTGTGGAG
CGGCACGGCG GCAGGATCTG GGTCGAGTCT GAAGAAGGGA GCGGGAGCAC ATTCCTCTTC
ACGATTCCAG AGAAACCGTT GTAA
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| Protein sequence | MSEELQANND QLLANERALL ESLERNTFLS DILDRSSQPF GVGYLDGRLG IVNHAFEELT
GYTADELQKM DWTATLTPPE WLDVERKNLE ELHRTGKPVR YEKEYIKKDG TRVAIELLVH
LVTDKEGNPQ YYYSFITDIT EQKRNREILS LSNRVLHSAE EHHTLQPLLE EYIRTLQEYT
GCDSIGVRIL DEQGNIPYLA YAGFSRDFYE QENPLSVRTD HCICINVIEG TTDPSLPFYT
AGGSFMINAT TKFRATESDE EKEKTRNTCT MVGYESVALI PIRKGDQIMG LLHLADHQEG
MISAEKVRVL EQVAYALGAS IVRVQTEEAL RKQEKTAQAI LAAAKESIWL FGTDDTILMA
NPTALVRLGG KDTGEVIGHQ YSEFMTSELA QARRARIEEV ISSRRSVQFE DIRAGTIFIH
TFCPVFDEAG AVSSIAAFSR DITGIRQADE ELLKKNEGLH ILNEELTATQ EELRQSIDEL
TTMEHELRET GQYLENLIQY ANAPIIVWDP AFRITRFNHA FELLIGRKAA DVIGQPLELL
FPKKFAEPVL EIIRKTTRGE RMEVVEIPIL HQNGEIRTVL WNSAAIFGSD GETVLSTIAQ
GQDITERKRT EEALHEAHLR LTHHIENSPL AVVEFDAQFR VTRWSDEAEK VFGWTMAEVM
GRTIDEIPWV YEEDVDRVAS ISADMMNGKA PRNKHTNRNY RKDGAVITCE WYNSALRDET
GELVSILSQV LDVTERDRAE ADLLEKNQEL SELNEELTAT QEELRQSIDE LTTMEHELRE
TGQYLENLIQ YANAPIIVWD PAFRITRFNH AFELLIGRKA ADVIGQPLEL LFPKKFAEPV
LEIIRKTNDG ERMEVVEIPI LHQNGEVRTV LWNSAAIFGA DGETVQSTIA QGQDITKRKW
AEEALRQSEE QYRMLFNTLT EGFCIIEMLF DADERPIDYR FLEINPAFER QTGLHEAQGR
LMRDLAPNHE EHWFEIYGTI ALTGEPVRFE NEAKALNRWY EVSAYRVGGP ESRRVAILFN
DITERKQAEE VLKTIADNLK ASNQELEQFA YIASHDLKEP LRMVTCFSQI LERQYKGQLD
ADADEFIGYI VDGALRMEAL INDLLLYSRI NQGMRPVERV DMKHAIEEAI SNLIIPIRER
NARITRGAMP SIQGDLSQMV QLFQNLIGNA MKYCPEEREP EIWINAERTG KGWTFSVKDN
GLGIDPAYHE QIFMIFRRLH TKAEYPGTGI GLAVVKRIVE RHGGRIWVES EEGSGSTFLF
TIPEKPL
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