| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpal_0907 |
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| Symbol | |
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| ID | 7272400 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosphaerula palustris E1-9c |
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| Kingdom | Archaea |
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| Replicon accession | NC_011832 |
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| Strand | + |
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| Start bp | 932683 |
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| End bp | 935220 |
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| Gene Length | 2538 bp |
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| Protein Length | 845 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 643569548 |
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| Product | Carbohydrate binding family 6 |
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| Protein accession | YP_002465984 |
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| Protein GI | 219851552 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3291] FOG: PKD repeat |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.00955406 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.403954 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACACTGA TACACAGAAG GATGACATGG CCGCTTCTTA TGCTGGCCAT CATCTCATGC
CTGTTGATGA TCGCACCGGC ATCGGCTGAA TCCTTTCATC TGACCGGAAC CCTGATCAAT
GGATCCATCA ATGGGAACAC CAATCAGCCA ATAGCAAATA CGAATGTCAC ATTCCAGATA
AATTCACCTT TTTTTCAAGG GACTATCAAT GGGACAACAG AGACAGATAA TCTCGGAAAC
TTCGATCTCT CCTTTGACCC GGGAATTGGT ATACCCCCTT TCATTTCGAT CACGTGCTCT
GCCACAACGA TTGGATATTC TGTATACCAG TCCCAGGCTC CAATCATAGT GATGGTAGGT
TACGCTAATA TTGGCTCCAT CTATCTCACC CCACTACCAG TTCCGATAAC TCTGACGGGA
ACTGTTGTTG ATAAATTCTC CGGTCTACCA GTGCCTAATA TGCAAATTGA CTCCGGCAGC
GCCTCGGACA CCTCCAAACA GGACGGGAGT TTCACCCTCT TTGAAGCTCC GGAGACAGGA
GGTTCCATGG ACTTCGAGAT CTATGCAGAT AGATACTATG AAGGTCACCA GGACACATTA
TCTGTCTCTG AAGAAGAGAT CGCACGTGGA TCAAAGGACC TCGGAACCGT CACTATCACG
CCACATTATG GAGGTTACGT CACTGACAAA TCCACCGGTC AGCCTTTGTC CGGCGTCCAG
CTCACCATCA CCAACGATCC GTCATCGCAG GTTGGAAACG GGGGGACGGG AACATCTGAT
GAAACGGGAT ATTACCGGAT AAGACTGCCC GCGAAGGGCA TCTCTTCGAA CAATAGCCTG
CGTGATACTG GTGCTGACAA TTCTGTTCGG TATCTGGTTG CAGTCAAGGA TGGATATCAG
CTCTATTCCG CCAATGTCAC GATACGGGAT GAAGAGGCCC CCTTTAACGT CGCGCTCTCC
CCGAGCTTTG CAGCGAACTT CCTCGCACTC GGCCATGTGG GCCAGGCCCC GTACTCTGTC
CGATTCATGG ACCAGTCGAC CGGCTCGCCG ACCGCCTGGA AGTGGGACTT CGGCGACGGC
ACCACCTCGA CCGAGCAGAA CCCGACCCAT ATCTACAACC AGACCGGTGT CTACAACGTG
GCGTTGACGG CATCGAACGA TAAGACGAGC GACACCTGCA CCCAGTACCG GTGTATCATT
GTGAACGCCG TACCAGTGGC GAACTTCACC GCGAACGTGA CCGCCGGGCA GACGCCCTTC
ACCGTGCAGT TCACCGACCA GTCCACCAGC GGTGCGGACG GGTTTCAGTG GCAGTTCGGC
GACGGGACCA CCTCGACCGA GCAGAACCCG GTCCACACCT ACACGAGCCC GGGATCGTAC
TCGGTGATGC TGACGGTATC AGTACCTGAC TACGGCAGTG TCTTCGCTCA GAAGACCGGG
TACATCTCGG TAAGCGGTCC GTCATCGGTC GGGTTCACGG CGAACGTCAC CGCCGGCCTC
TCCCCGCTCG CCGTGCAGTT CAATGAGTCG ACGAACGAAT CGGTCCAGTA TTCCTTCTGG
CATTTCGGGG ACGGGGCCAC CTCTGCAGAG AAGAGCCCGG TCCATGTCTA TGATGCAGCC
GGCAGTTATT CGGTCTCGCT GATGACCGTC GGGTCGAACG GCACCGAGGT GAAGACGGTC
GATAACTTCA TCAATGTCAG CGCACCGGTG ACCCCGACGG TCACGCCCAC AGCGACTGCC
ACGGCGACGG TGACCCCGAC GCCGACCGGA GCCCTGCCGG TGGCCAACTT CACGGTCACC
ACCGGAGCCC CGGGGTCGTC CGACATCACG GTCACCGACG CCTCGACGAA CGCGACTTCG
GTCCACTACA GCCTCGGTGA CGGTGCCACC ACCGCCTATC CGACCTTCCG GTACACCTAC
TGGCAGGCCG GAACCTATAC GATCGAACAG ACCGCAACCA ATGCGGTTGG GTCCTCGAAG
AAGAGCATCG TCGTAACCGT ACCGGTTGCG GCTCCAACAA CAACGGTGAC CCCGACGGTG
ACAGTCACAA CCACTGTCTC GCCGACGGTG ACGACGACCA GTCAGGCTTA CAACGGCCCG
CACACGATCC CCGGGAAACT GCAGGCTGAG GACTACGACC TCGGCGGTGA AGGGGTCGCC
TACTATGACA CGACCCCTGG GAATGAGGGC GGGGTCTACC GGCATGACGA TGTCGATATC
GAGCAGCTCG ATACCGACGG CTCGCCGAAC GTCGGCTGGA TCCGATCCGG TGAGTGGATG
GCCTACACGG TGAACGTCGC CAGCACCGGC ACCTACACCG CCGGGTTCAG GGTCGCCTCA
TCACACTCCG GTTCATCCAT CAAAGTCTAT GTCGACGACG GCACCACCCC GGTGGCGACC
GTGAACGTCC CGAACACCGG CGACTGGCCG TCCTTCCAGA CCGTCTCGGT GCCGGTGACG
CTGCCGGCAG GACAGCACCG GCTCAAATTC TCATTCCCGA CCGACTATGT GAACATCAAC
TGGGTCACCT TCGCCTGA
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| Protein sequence | MTLIHRRMTW PLLMLAIISC LLMIAPASAE SFHLTGTLIN GSINGNTNQP IANTNVTFQI
NSPFFQGTIN GTTETDNLGN FDLSFDPGIG IPPFISITCS ATTIGYSVYQ SQAPIIVMVG
YANIGSIYLT PLPVPITLTG TVVDKFSGLP VPNMQIDSGS ASDTSKQDGS FTLFEAPETG
GSMDFEIYAD RYYEGHQDTL SVSEEEIARG SKDLGTVTIT PHYGGYVTDK STGQPLSGVQ
LTITNDPSSQ VGNGGTGTSD ETGYYRIRLP AKGISSNNSL RDTGADNSVR YLVAVKDGYQ
LYSANVTIRD EEAPFNVALS PSFAANFLAL GHVGQAPYSV RFMDQSTGSP TAWKWDFGDG
TTSTEQNPTH IYNQTGVYNV ALTASNDKTS DTCTQYRCII VNAVPVANFT ANVTAGQTPF
TVQFTDQSTS GADGFQWQFG DGTTSTEQNP VHTYTSPGSY SVMLTVSVPD YGSVFAQKTG
YISVSGPSSV GFTANVTAGL SPLAVQFNES TNESVQYSFW HFGDGATSAE KSPVHVYDAA
GSYSVSLMTV GSNGTEVKTV DNFINVSAPV TPTVTPTATA TATVTPTPTG ALPVANFTVT
TGAPGSSDIT VTDASTNATS VHYSLGDGAT TAYPTFRYTY WQAGTYTIEQ TATNAVGSSK
KSIVVTVPVA APTTTVTPTV TVTTTVSPTV TTTSQAYNGP HTIPGKLQAE DYDLGGEGVA
YYDTTPGNEG GVYRHDDVDI EQLDTDGSPN VGWIRSGEWM AYTVNVASTG TYTAGFRVAS
SHSGSSIKVY VDDGTTPVAT VNVPNTGDWP SFQTVSVPVT LPAGQHRLKF SFPTDYVNIN
WVTFA
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