| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpal_0877 |
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| Symbol | |
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| ID | 7272367 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosphaerula palustris E1-9c |
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| Kingdom | Archaea |
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| Replicon accession | NC_011832 |
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| Strand | + |
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| Start bp | 903473 |
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| End bp | 906625 |
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| Gene Length | 3153 bp |
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| Protein Length | 1050 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 643569522 |
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| Product | PAS/PAC sensor signal transduction histidine kinase |
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| Protein accession | YP_002465958 |
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| Protein GI | 219851526 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2205] Osmosensitive K+ channel histidine kinase |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.948624 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAGGTG CAGAATCAGG ACTGGCAGAT GATCTCGTCT TCCGACGGGC CACGATTCTC
TTTGGTGCCC TTGCTGCTGG AGTCGGCGTT CTGGGGCTCG TGGGGCTTGT GTTCAATATC
ACATTGTTCA AAAGCGTCTT CCCGGGGTAC AAGACGATAG CATTCTCCGC CGCCCTGCTC
TGCACCCTGT TCGGGGTGAT CCTTGCATTT CATCCGATAC GCCGGTTCAG GGGGAAAGCT
CGAGTCGTCG TACTGCTCGT CGTCGCAGCG GTCGCCGTCA TTGAAGCACT CGAACTTCCT
TTCAATATCG CCGGGAGTCA TTTCTTCATA GAGGCCGGAA TGGTCCGTAT CGGAGATCTC
CTCACAGGCC AGCCCACATC CGCAGTATCT CCGATAGCTG TCTCCCTGTT CATCCTTTCA
GCGATTGGGT TGTTTATTCT GTTCTGGAAT CCGGATCCCG CAGAGGGGTG GGTCAGAGAT
CGCTCTGCCG TCAGCGTCAT CGGTCTGATC GTCGGACTGG TGGGCTTCAC GTTCCTGCTC
AGTTATGTCT ACGGGGCCCC ATACCTCTAC GGGACACTGC TGCTCCCCAT CGCAGCACCG
GCGGCATTCG CGCTGGTCTG TATCGGGGCC GGCCTCATGG TCGGTGCCGG TCCGGAAGCG
TTTCCCCTCC GGTTCTTCGT TGGTCCATCC ACCGTTGCCC TCCTGCTTCG CACGTTTCTT
CCACTGGCAC TGGCCGTCGT ACTCTTTGAA AGTTTCCAGA ATGTGACCCA GTCCTTCCTC
AATAGAACCC ATGACGCGCT CGAGGTATCG GCTACCCTCG TCGTGTTCTC CCTGATCACC
GGGTATCTGG TCATTCGGGC TGCCAGAGGA CTCGGGGGGA CTCTGGAGGT CGAGGAGCGG
AGACGGAAGG CGGTTGAAGA GGAACTTGCC CGGAATAACA TGGATCTCTC CGCCACGAAC
GAGGAACTCA CTGCCACGGA GGAAGAACTG AGGGCAAACC TCGATGAACT CGCCCGGGGA
GAGCACGAGT TGCGGAAGAG CGAGGAGAAG TACCGTTCGC TCTTTGAAAA CCTCCCGGAC
GGCTTCGCCT ATTGTCGCAT GATCTATGAC AAGGATGGGC TCCCGGAAGA TTTCGTCTAT
CTCGAAGTCA ACCCTGCGTT CAACGAGATC ACCGGGGTGG GGATTGTCAT GGGAAAGCGG
GCGACCGAGG TTTTTCCCGG GATAAAGGAA GCATTCCCTG AACTGTTTGA AACGTATGGC
CGGGTCGCCC TGACCCGGAA GCCTGAGGTA TTTGACCTGG ATTTCAAACC GATTGGAAAA
TGGCTGCAAA TCTCAGTCTA TTCTCCATTG GACCTGCACT TTGTTGCGAT TTTTGAGGAT
ATCACATCGC GAAGGAAGGC TGAGGAAGCC CTGACGCTCT ACAAGATCTT CACTGAAAAC
GCCAACGATA TCATTCTCTT CATCCGCAGG AACGACGGTC GAATCCTTGA GGCGAACAAG
GCCGCGATCG TGACCTATGG ATATACAAGG GAAGAACTGC TCGGTTTGAC TATATTTGAG
ATCAGGCCTT CTGACAGGGT CGATACCATC ACCCGTCAGC TGGACAAGGC CGCACAGGAC
GGGATCGTAT TCACGACGCT CCATCGGAAG AAAGATGGCA GCGGCATCCC GGTCGAAGTC
AGTTCGGTCT CGATGATCTT CGAAGGCGAG CAGGTGATCG TATCGATCAT CCGCGACATC
TCCGAGCGCA GACATGCGGA GGAGGTCCAG GCTCTCCTCG CGTCGATCGT CACCCATTCG
GAGGATGCCA TCTTCAGCAA GACCCTCTCC GGGATCATCA CCAGCTGGAA CGCTGGTGCG
GAGAAGATAT ACGGGTACAC CTCGGAAGAG GCGATCGGAA AGCCCGTGTC GTTCCTTGCA
CCTGCGGAAT ACGCGGACGA AATTGAATTT ATCCTGGAGA AGGGCAGGGC CGGGGAACCG
GTTGAAAATT ATGAGACGAC GCGAGTGAGA AAGAATGGTC AGCGATTCGC GGTATCGATA
AGTGTTTCCC CGATTCGGAA CACAAGTGGT GAACTCATCG GATCATCGAC GATCGTCCGG
GACATCACCC TGCAGAAACA GGCAGATGAG AAGATAAAAT CATCCGAGAT ACGCTACCGC
CGGCTCTTCG AATCGGCAAA GGACGGGATC ATGATCCTGA ACCGGGATAC TGGCGAGATC
ATCGACGCCA ACCCGTTTAT TGGGTCCCTG ACCGGTTACC CCCAGGAAGA GCTTGTCGGA
AAGTATCTCT GGGATATTGG ATTCTTTAAG GATCTGGTCT CATCAAAGAT TGCCTTTTTG
GATCTGCAGA CTAGGGAATA TATCCGGTTC GAGGATCTCC CGCTTGAGAC GAAGGACGGA
CGGAAGATCG ATGTCGAATT CGTTAGCACT GTCTATCCCG TCGACCATAC CTCGGTCATC
CAGTGCAACA TCAGGGATAT CACCGAACGA AAAAAGACAC AGGACGCCCT CTCGATCGCG
AACAAGAAAC TGAACATCCT GAACAACATC ACCCGGCACG ATATCCTCAA CCAGCTCACC
GCGATCGAGG GATACCTTGA ACTCTATCAT GATGAATGCC AGGGGGATGC GAAGGCCCAG
GGGCATTTCA ACCAGCTGAT CGGTCTTGCA AAGACCATCG AGAACCAGAT CTCGTTCACC
AAATATTATC AAGATCTGGG AGTGCAGGCT CCGATCTGGC AGCGGGTGCA GGATGTGGCC
TGGAGCGCTG CGCGATCGGG AGGGTCTGGC GATATCCAAT TTTTCATTGA AGATATGCCG
CTCTGGATAT TCGCCGACCC TCTGCTCGAA AAGGTGTTCT ACAACCTGTA CGACAATTCG
CTCCGGCATG GCGAACGTGT TACGGAGATC CGTATCAGTG CACAGTTTTT GGGCGATGAC
TGCATCATCA CCGTGGAGGA CAATGGTGTC GGCATTCCGG CAGAGGATAA GGAGCAGATC
TTTGACCGGG GTGTGGGAAA ACATACCGGT CTTGGCATGT TTTTAGTGCG GGAGATCCTC
GCGATCACCG GGGTGACGAT CCATGAGACC GGCGAACCGG GCAGCGGTGC TCGATTCGAG
ATCGTGGTGC CGAAAGGTGC ATACCGGTCC TGA
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| Protein sequence | MTGAESGLAD DLVFRRATIL FGALAAGVGV LGLVGLVFNI TLFKSVFPGY KTIAFSAALL
CTLFGVILAF HPIRRFRGKA RVVVLLVVAA VAVIEALELP FNIAGSHFFI EAGMVRIGDL
LTGQPTSAVS PIAVSLFILS AIGLFILFWN PDPAEGWVRD RSAVSVIGLI VGLVGFTFLL
SYVYGAPYLY GTLLLPIAAP AAFALVCIGA GLMVGAGPEA FPLRFFVGPS TVALLLRTFL
PLALAVVLFE SFQNVTQSFL NRTHDALEVS ATLVVFSLIT GYLVIRAARG LGGTLEVEER
RRKAVEEELA RNNMDLSATN EELTATEEEL RANLDELARG EHELRKSEEK YRSLFENLPD
GFAYCRMIYD KDGLPEDFVY LEVNPAFNEI TGVGIVMGKR ATEVFPGIKE AFPELFETYG
RVALTRKPEV FDLDFKPIGK WLQISVYSPL DLHFVAIFED ITSRRKAEEA LTLYKIFTEN
ANDIILFIRR NDGRILEANK AAIVTYGYTR EELLGLTIFE IRPSDRVDTI TRQLDKAAQD
GIVFTTLHRK KDGSGIPVEV SSVSMIFEGE QVIVSIIRDI SERRHAEEVQ ALLASIVTHS
EDAIFSKTLS GIITSWNAGA EKIYGYTSEE AIGKPVSFLA PAEYADEIEF ILEKGRAGEP
VENYETTRVR KNGQRFAVSI SVSPIRNTSG ELIGSSTIVR DITLQKQADE KIKSSEIRYR
RLFESAKDGI MILNRDTGEI IDANPFIGSL TGYPQEELVG KYLWDIGFFK DLVSSKIAFL
DLQTREYIRF EDLPLETKDG RKIDVEFVST VYPVDHTSVI QCNIRDITER KKTQDALSIA
NKKLNILNNI TRHDILNQLT AIEGYLELYH DECQGDAKAQ GHFNQLIGLA KTIENQISFT
KYYQDLGVQA PIWQRVQDVA WSAARSGGSG DIQFFIEDMP LWIFADPLLE KVFYNLYDNS
LRHGERVTEI RISAQFLGDD CIITVEDNGV GIPAEDKEQI FDRGVGKHTG LGMFLVREIL
AITGVTIHET GEPGSGARFE IVVPKGAYRS
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