Gene Mpal_0868 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpal_0868 
Symbol 
ID7272358 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosphaerula palustris E1-9c 
KingdomArchaea 
Replicon accessionNC_011832 
Strand
Start bp894732 
End bp895955 
Gene Length1224 bp 
Protein Length407 aa 
Translation table11 
GC content65% 
IMG OID643569514 
Productbeta-lactamase 
Protein accessionYP_002465950 
Protein GI219851518 
COG category[V] Defense mechanisms 
COG ID[COG1680] Beta-lactamase class C and other penicillin binding proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGAACGA CAAGCGGAAC ACTAGTACAG GGACATGTCG AGGAAGGCTG GGAGAAAGTC 
TCCGATGCCT TCCGTGAGAA CTTCGAAGGG ACACCCGGCG AGGTCGGCGC TGCATGCTGC
GTCTACGTCG GTGGTCGTCC CGTCGTCGAT CTGTGGGGCG GCCTCGCCGA TCGCGAGACG
AACCGGCCGT GGGACAAGGA CACCATCGTC GCCGTCGCAT CCACGACCAA AGGGGCTACC
GCGATCTGCG CCCACCTGCT GGTACAGCGC GGCTTGCTGG ATCTTGACGC TCCAGTGGTC
AAGTACTGGC CGGAGTTTGG CGCTGCCGGG AAGGAGAAGA TCCTGGTGCG CTGGCTGCTC
TCACACCAGG CCGGTCTGCC GGTCATCGAT GGGCCGCTGA CCTTCGAGGA AGCCTGCGCC
TGGGATCCGG TCATCCGGGC ACTAGAGGCG CAGAAGCCGG AGTGGCAACC GGGCACCGAG
CATGTCTACC ACAGCGTGAC CTTCGGATTC CTGGTCGGGG AGCTCGTGCG CCGTATCACC
GGCAAGTCGC TCGGTCGCTT CTTTGCCGAC GAGGTTGCTG CCCCGCTCGG GATGAGCGCC
TGGATCGGGC TGCCTGAGAA GGAAGAGGGA CGGGTGGCAC GGATCGAGTA CGCCGCTCCG
TTCACTATGG AGGAGATGAC CGCCGGGATG ATCGAGACCA CCGGTCTCGA TAGGGACACG
GTCATCGTCT GGATGAACGC CGTGTGGGGC CCGGACTCCG TGCAAGCCCG CGCCGGCGTG
CTCGGCGGGG CTATGGATCC TACTAGCGGC TATACGACCA CGCGTGCCTG GCGTGCGGCT
GAGTTCCCCT GCTGCAACAT GTTCACAGAC GCTCGATCGC TGGCACGGAT GTATGCGGCC
ACGGTGAGCG AGGTCGACGG CGTGAGGCTG CTTAATCCGG CGACGATCAA GAGGATGACC
GTCGTCCAGA CCAACAGGAC GCGGATGCAC GGGCTACCGC CGAGACTGGA TATTCCGGCC
GACCGCTCCT TCAACATGTC GCTCGGGTTC TGGCGGGCCT GCCGCCCGAT GCCCTGGGTC
GGGCCCGGGT CGTTCGGTCA CCCCGATGCC GGTGTCGGCT TTGGCTACGT CACGAATCTG
TGGTCATACT GGATTGGTGA ACCACGGGCG CAGAACCTTG CCGACGCGGT CGTCGACTGC
CTTGGTGATG GCTACCGCAC ATGA
 
Protein sequence
MGTTSGTLVQ GHVEEGWEKV SDAFRENFEG TPGEVGAACC VYVGGRPVVD LWGGLADRET 
NRPWDKDTIV AVASTTKGAT AICAHLLVQR GLLDLDAPVV KYWPEFGAAG KEKILVRWLL
SHQAGLPVID GPLTFEEACA WDPVIRALEA QKPEWQPGTE HVYHSVTFGF LVGELVRRIT
GKSLGRFFAD EVAAPLGMSA WIGLPEKEEG RVARIEYAAP FTMEEMTAGM IETTGLDRDT
VIVWMNAVWG PDSVQARAGV LGGAMDPTSG YTTTRAWRAA EFPCCNMFTD ARSLARMYAA
TVSEVDGVRL LNPATIKRMT VVQTNRTRMH GLPPRLDIPA DRSFNMSLGF WRACRPMPWV
GPGSFGHPDA GVGFGYVTNL WSYWIGEPRA QNLADAVVDC LGDGYRT