| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpal_0848 |
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| Symbol | |
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| ID | 7272338 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosphaerula palustris E1-9c |
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| Kingdom | Archaea |
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| Replicon accession | NC_011832 |
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| Strand | - |
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| Start bp | 875042 |
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| End bp | 878020 |
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| Gene Length | 2979 bp |
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| Protein Length | 992 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 643569496 |
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| Product | Tetratricopeptide domain protein |
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| Protein accession | YP_002465932 |
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| Protein GI | 219851500 |
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| COG category | [S] Function unknown |
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| COG ID | [COG4995] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0302645 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.423245 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATGATA AAAAAGAGTA TATTGAAGAA AGGATTCAAT ACTATTTGCA GAATCTTGAA
GTTTACACTC AAGAAAAGTT TCCTGAAGAA TGGGCAACAA CACAGAGTAA TCTAGCTGGT
GCCTACACGG AACGTATCAA TGAGAGCTCT GCAGATAATA TTGAAAAGGC TATTTGTCAT
TACAAACTTG CCCTAAAGGT ATTCACCCAA AGTGCATATC CTGAAGATTG GGCAATGACA
CAAAATAATC TAGCCATCGC TTATATAAAT CGGTGTTATG GTGTAAAAGC AGATAATATT
GAGATTGCAA TTACTCTACT AATATCAGCA TTAAAAGTGA GGAAACGAAA AGCATCCCCT
AAAGAATGGG CAAGAACACA ACATAATTTG GGAATAGCCT ATAAGGAGAG AATCCGAGGA
AATAAGGTCA AAAATATCGA GAGATCAATT AAACATGCAA AGAATGCTCT TAAGGTATTT
ATTCCTGATA GATATGCTTT GGACTATGCC AGAATTCAGA ACACTCTTTC AACTGCCTAT
CTTAATAAGA TTTGTGGGGA AGAGACAGAT AACATCGATA CAGCTATCTA TCATGCAAAT
CTTGCTCTAG ACCATTTAAA CAAGGATGAG TTTCCTAATG ATTGGGCAAT AACACATAAC
AATCTTGGAT TGGCTTTTCT CGAGAAACAA AAAGAAAATT CTGATACTAA CCTTAAGACT
GCTATCACTC ATCTCAATAA TGCTCTCAGT GTGTACACAA AAAACGCGAT TATGGAGAAA
ATGGCTGTGA TCCATAGCAA TTTAGCCATG GCCTATCTCT TCCTTGTTAC AGATGAGAGA
GAAGAGAGGG CTGAAAATCT TAAATTGGCC ATAATCCATG CAAATTGGGC CCTTAAAGTA
TTTACCACAG AGACTGACCC TGAAAAATAT GCATCAACTC TAAATTATCT CGCAATTGCA
TTCGAAAACC TTAACTTTGG TGATCCTTCT GATAATATTG AAACATCTAT CGATATTTAC
TCATTAATTG GAGAAGTTTA CACTTTAAAG GCCTATCCTC ATGAATTTGC CAGAACACAG
TATAATCTGG GTATCGCATA TTCCAATCGA ATTGCCGGGA ATAAAAAAGA AAATATTCAG
GAAGCAGTAT CGCACTTTCA GTTAGCACAA AAAGTCTGGA CATATGATGA TCATCCAGCA
GAACATAGGG ATACCTGGAA AAAAATTGGA GATTCATATT TTCAACTGCA AAACTGGAAT
GATGCCTGTA TCGCATATTA CAAAGCATGT GAGATCAGCG ATAACCTCAT CATAGAAGCG
TACACAGAGA GAGGACGCCA AAATGAAGTT GGTAAAATTG CAAATATTTA TTCAAATCTT
GCGTATTGCC AGATATCAAT GGGACATCTG CCTGAAGCTC TAGTAACTTG TGAAAAAGGG
AAGACCCGTC TTTTTAATGA GACTCTCTCG ATAATTGGGC AAGACCTAAA CAATATACCT
TCTGATAAGC AACTGCGTTT CATTAAGATA CGAAAAGAAT TAAAAGAGAG TATGACAGAA
ATGCCCTTGG ATTTTACAAG AAACTTTTAT AAATATGATC CCATGTCATC GAAGAGGATA
AAAAAGGCTC GAAATAAACT GAAAGCACTT GTGAAAGAGA TCAAGGTGAA TAATCCGGAT
TTTCTTTGGA CAAATCCAGA TCTTACGACA ATCCTCGCTG AAATCCCCGA AAAAGGAGCA
ATTGTAGTTC CGCTGATTAC ATCCCAGGGA GGAGCAGTTT TCATCGTACC CTCTGGAACC
ATCACAATCG CCCCTCATAA TGTGTTGAGG TTAAATGAGT TTGATAGTAC AGCTCTTCAT
GTACTCATGC ATGGCAACGA GAATCATACA GGGTGGCTAC AAACGTACAA CAGAAGGGTC
AAATCACTTG AGTCCAATTG TGAAGAAATA AAAAGGAAGG CTCTTGAGGA TTGGATCTCA
ACAATAGGGG ATATTTCAAA AAGATTATGG GATCAATTTA TCGGACCCAT CTTTACCCAT
CTCAAATCTC TGGATGTCCA ATTGGGAACT CCAATTCTGA TAACTCCACC CGGACTTTTA
AAACTTCTTC CGCTCCATGC AGCTTATCGG ATAGAAAATG GGTTATTACG TGCTTTTCTT
GATGATTACA CGATATCGTA TGCTCCAAGT ATAACGACAA TTAGTATTAT AAAAAAAATG
AAACCGATCC AGAAATCTGA AAAGGATCGA TTGCTAATGG TAAAACCTAA CCATAATAAT
CTCTATTTTT CAACAGTTGA ATGTAAAGCA ATCACCAGTC TTTTTGGTGC TGACAAAGTT
AAATCACTCG AAGATAAAAA CGCAGTCAAG GATATGGTGG TAAAGTTTGC TCAAAATAAA
CAATACCTGC ACTTTTCCAC CCATGGTTAT TTTGTGAAGG AAAATGTTAT GCAATCTGGT
CTAGTACTTG AAGATGGGAT GTGGACACTT GCAGATATTT TATCTGACCT CAATATTGCA
GCTGCTAGAA TGGTAACATT ATCTGTGTGT GAATCAGGCA TTCCTCAGTA TCAAAAAATC
CCTGATGAAT ATATTGGTAT ATCTGCAGGT TTTCTGCATG CTGGTGCTTC CTGTGTTATT
AGTTCTCTCT GGGCAGTGAA TGATGTAGCT ACCAGTATGT TGATGATGAA ATTGTATTCT
TCACACTTAA TAGACGGTTT ATCTCCTGTT TGTGCATTGA GAGAGGCGCA AATATTTATT
CGTAATGCAA CGAATCAGGA AGTTGTGAAC TTTATGTGTA ACGGAAATAT CTCTCTTGAT
ATTGATAGGG ACTACTCGTG TATAATACAA GAACCAAATG AAAACCAGGA TCAAGCCAAC
TCTTCATCTT GTATATCAAA AAGAGGGAAT CCAATTCCTG GACCATTTGT CAATCCATAT
TTTTGGGCTG GTTTTGTCAT AAATGGGGTA TACAAGTAA
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| Protein sequence | MNDKKEYIEE RIQYYLQNLE VYTQEKFPEE WATTQSNLAG AYTERINESS ADNIEKAICH
YKLALKVFTQ SAYPEDWAMT QNNLAIAYIN RCYGVKADNI EIAITLLISA LKVRKRKASP
KEWARTQHNL GIAYKERIRG NKVKNIERSI KHAKNALKVF IPDRYALDYA RIQNTLSTAY
LNKICGEETD NIDTAIYHAN LALDHLNKDE FPNDWAITHN NLGLAFLEKQ KENSDTNLKT
AITHLNNALS VYTKNAIMEK MAVIHSNLAM AYLFLVTDER EERAENLKLA IIHANWALKV
FTTETDPEKY ASTLNYLAIA FENLNFGDPS DNIETSIDIY SLIGEVYTLK AYPHEFARTQ
YNLGIAYSNR IAGNKKENIQ EAVSHFQLAQ KVWTYDDHPA EHRDTWKKIG DSYFQLQNWN
DACIAYYKAC EISDNLIIEA YTERGRQNEV GKIANIYSNL AYCQISMGHL PEALVTCEKG
KTRLFNETLS IIGQDLNNIP SDKQLRFIKI RKELKESMTE MPLDFTRNFY KYDPMSSKRI
KKARNKLKAL VKEIKVNNPD FLWTNPDLTT ILAEIPEKGA IVVPLITSQG GAVFIVPSGT
ITIAPHNVLR LNEFDSTALH VLMHGNENHT GWLQTYNRRV KSLESNCEEI KRKALEDWIS
TIGDISKRLW DQFIGPIFTH LKSLDVQLGT PILITPPGLL KLLPLHAAYR IENGLLRAFL
DDYTISYAPS ITTISIIKKM KPIQKSEKDR LLMVKPNHNN LYFSTVECKA ITSLFGADKV
KSLEDKNAVK DMVVKFAQNK QYLHFSTHGY FVKENVMQSG LVLEDGMWTL ADILSDLNIA
AARMVTLSVC ESGIPQYQKI PDEYIGISAG FLHAGASCVI SSLWAVNDVA TSMLMMKLYS
SHLIDGLSPV CALREAQIFI RNATNQEVVN FMCNGNISLD IDRDYSCIIQ EPNENQDQAN
SSSCISKRGN PIPGPFVNPY FWAGFVINGV YK
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