| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpal_0840 |
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| Symbol | |
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| ID | 7272330 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosphaerula palustris E1-9c |
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| Kingdom | Archaea |
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| Replicon accession | NC_011832 |
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| Strand | + |
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| Start bp | 866469 |
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| End bp | 867641 |
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| Gene Length | 1173 bp |
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| Protein Length | 390 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 643569489 |
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| Product | NHL repeat containing protein |
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| Protein accession | YP_002465925 |
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| Protein GI | 219851493 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3391] Uncharacterized conserved protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0361513 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.0920788 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGGCATG TATTCAGTAC GACCTGTGTC CTGGTGCTGG TGTGCTGCGG CGTTCTGGTC
GCGGCGGTAT CTGGGGAGTA TGTGTACTCG GCTCAGTGGG GTAGTTCCGG TGCCGGGATC
GGGCAGTTTG ATCATCCTGG TGGCGTTGCC GTCGACAGTG CCGGCAATGT CTACGTGGCG
GACACTGAGA ACGATCGGAT CCAGAAGTTC ACCTCCTCAG GCACGTTCGT AACAGTGTGG
GGGAGTTCTG GCACCGGGAT CGGACAGTTC GCCCATCCGG ACGGAGTCGC CGTCGATGGT
GCCGGCGCTG TCTACGTGGC GGACACTGAG AACGATCGGA TCCAGAAGTT CACCTCCTCT
GGTTCCTTCC TTGGAGGATG GGGTAGTTCC GGCTCGGGGG CTGGGCAGTT CAACGCTCCG
ACCAGCCTCG CTGTCGATGG TGTGGGAAGT ATCTATGTTG TCGATTCGTG GAACGATCGG
GTCCAGAAGT TCACCTCTTC CGGTTCCTTT CTCGCAGCGT GGGGGAGTCA CGGGTCCGGG
GTTGGAGAAT TCGACGAGCC CTTTGGCATC GCGGTCGATG GAACCGGCAA TGTCTACGTA
GCCGATACGT ATAACAACCG GGTTCAGAAA TTCACGTCCG CTGGCCTCTT CGTCTCCACC
TGGGGCACCT CCGGCACCGG GACCGGACAG TTCAACTGGC CCTGGGGTGT CGCTGTTGAC
AGTGCCGGCG CCGTCTATGT GACTGATGTG TGGAATAACC GGATCCAGAA GTTCACGTCT
GCCGGTCTCT TTGTCTCCAC CTGGGGCACC TCCGGCACCG GGCCCGGACA GTTCACCTGG
CCGTATGGCA TCACGATCGA TGGGGTCGGC CAGGTCTATG TGACCGATGA ATGGAACAAT
CGGATCGAAG TTTTTGTTTC ATCTGGAGAA CCGACCCCGA CGCCGGTCCT GGTCACGGTC
ATCCCAGGTG GTGTGGGGGT CCCGACCAGT CCCGATAATG ACGGGCTCTT CTGGGATCTG
AACGGGGACC AGAGGGTCGA TTTCAATGAT GTGGTGCTGT ACTTCAACCA GATGGATTGG
GTCGCGGATA ATGAACCCAT CAAAGCGTTT GACTTCAATA AAAACGGTGT AATCAACTTT
GATGATATCG TTCTCCTCTT CAATCGTCTG TAG
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| Protein sequence | MGHVFSTTCV LVLVCCGVLV AAVSGEYVYS AQWGSSGAGI GQFDHPGGVA VDSAGNVYVA
DTENDRIQKF TSSGTFVTVW GSSGTGIGQF AHPDGVAVDG AGAVYVADTE NDRIQKFTSS
GSFLGGWGSS GSGAGQFNAP TSLAVDGVGS IYVVDSWNDR VQKFTSSGSF LAAWGSHGSG
VGEFDEPFGI AVDGTGNVYV ADTYNNRVQK FTSAGLFVST WGTSGTGTGQ FNWPWGVAVD
SAGAVYVTDV WNNRIQKFTS AGLFVSTWGT SGTGPGQFTW PYGITIDGVG QVYVTDEWNN
RIEVFVSSGE PTPTPVLVTV IPGGVGVPTS PDNDGLFWDL NGDQRVDFND VVLYFNQMDW
VADNEPIKAF DFNKNGVINF DDIVLLFNRL
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