| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpal_0827 |
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| Symbol | |
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| ID | 7272317 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosphaerula palustris E1-9c |
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| Kingdom | Archaea |
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| Replicon accession | NC_011832 |
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| Strand | + |
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| Start bp | 849067 |
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| End bp | 850635 |
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| Gene Length | 1569 bp |
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| Protein Length | 522 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 643569476 |
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| Product | polysaccharide biosynthesis protein |
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| Protein accession | YP_002465912 |
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| Protein GI | 219851480 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2244] Membrane protein involved in the export of O-antigen and teichoic acid |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.769454 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.213046 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCCTAA ACTCGCCCCC CAAAAAAGAT ACTACCAACA GCCGTTTTGC CGCCCAACTC
CCCCTGAACC TCGCGGCAAA CATCGCCTAC TTCCTAGTCA ACGTTGTCAT CGGGGTCCTC
CTTGTACCAT ATTTCATCAG TACCCTCGGT GTTGCGGCCT ATGGGCTCAT CCCGCTGGCG
ACCTCGATCA CCGGGTACGT GGCGATCGTG GTCCAGTCGC TCAACTCCGC CGTCACCCGG
TTTCTCACCG TCGACCTTCA ACGGGATGAC TTTGCGGCAG CGAATCGAAC ATTCAATACC
GCCCTCTTCG GCCTCTCTGC GATCATTCTC CTGATGGTTC CGGTCGTCCT CGTGGTAGCA
TGGTTTGTCC CGACGATCTT CAGCATCCCG GCCGGACAGG AGAACGACGC AGTCCTCCTC
TTCCTTGGAG TATCGGCCGC TTTCATAATA AGGTCCTGGA GCGGGAACTT CACGGTTCAA
CTCTTCGCTT ACAACCGCCT CGACCTTCAG AACCTTGTCA ACCTCACTAA TGTCCTTGTC
CAGACCGGGT TTATCGTCCT CTTCTTCGTC CTCCTCGGTC CGAATCTCGC CTTCATCGGC
GGGGCCTATC TGGCCGGAGC CATCATAGCA TCTGGTGTTT CGATCGTCCT TGCCCGACGA
GTCTCTCCAA ATCTTTATGT CTCGATCCGC TCCTTTGATC GCAGAAGGGT TCGGGATCTC
TGCGGGATGG GGTGGTGGTC GGTGGTCGAC CAGATTGGTT CCCTTCTCTT TCTCCAGATC
GACCTCATCG TCGTGAACCT TTTCTTTGGG GCGACATCTG CAGGGGAGTA CGCGATCGCC
CTTCAGTGGG TGGTGCTCCT GCGGGCGATC TCAGGTGTGC TCGCCGGGGT GCTGACCCCG
ATGTTCCTCA CCTATTATGC GAAGGGGGAG ATCGAGACCC TGATCCGGGT CTCGAAGAGT
GCCGTCAAAC TGATGGGGCT CGCCATGGCA CTCCCGATAG GACTGGTATG CGGTTTTGCT
CCGCAACTCC TCACGGTTTG GGTTGGTCCC GACCTGGTTT TCCTCGCTCC TCTCATGATC
CTCCTGACGA TGCATCTCGC TGTAAATCTT GCAGTACTCC CTCTCTTCTC GATAGAGGTT
GCCTATAATC GGGTGCGGGT GCCGGGGATC GTAACCCTCT TTGGAGGAAT CGGAAACTTC
ACCCTGGCGA TCTCCCTCGC CCTGTTCACT GGTTGGGGGT ACTATGGTGT TGCTGTTGCG
GGTGCGATCG TGCTCACCCT GAAGAACACC CTCTTCACCC CCCTGTACTC GACCCGAATC
CTCGGTGTTG GTGTTCACAC CTTCACCCGA TCGATGCTCC CCGGGATCGG CGCCGCCATC
CTCCTCGGAG TTCTGGCTAC TGTCCTGGGC ACGCTCTTCT CCCTCACTGC TCTGATCCCC
CTCACCATCG CTGGCGGGTC CCTCGCTCTG GGATACCTTC TCCTCGTATG GAGGTTCGGA
CTGTCATCAT TTGAACGCGG GTTGTTTGGA TCTTATCTCC CCGAGAACCT TCGGAGGTTT
CTTCAATGA
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| Protein sequence | MALNSPPKKD TTNSRFAAQL PLNLAANIAY FLVNVVIGVL LVPYFISTLG VAAYGLIPLA
TSITGYVAIV VQSLNSAVTR FLTVDLQRDD FAAANRTFNT ALFGLSAIIL LMVPVVLVVA
WFVPTIFSIP AGQENDAVLL FLGVSAAFII RSWSGNFTVQ LFAYNRLDLQ NLVNLTNVLV
QTGFIVLFFV LLGPNLAFIG GAYLAGAIIA SGVSIVLARR VSPNLYVSIR SFDRRRVRDL
CGMGWWSVVD QIGSLLFLQI DLIVVNLFFG ATSAGEYAIA LQWVVLLRAI SGVLAGVLTP
MFLTYYAKGE IETLIRVSKS AVKLMGLAMA LPIGLVCGFA PQLLTVWVGP DLVFLAPLMI
LLTMHLAVNL AVLPLFSIEV AYNRVRVPGI VTLFGGIGNF TLAISLALFT GWGYYGVAVA
GAIVLTLKNT LFTPLYSTRI LGVGVHTFTR SMLPGIGAAI LLGVLATVLG TLFSLTALIP
LTIAGGSLAL GYLLLVWRFG LSSFERGLFG SYLPENLRRF LQ
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