| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpal_0801 |
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| Symbol | |
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| ID | 7272290 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosphaerula palustris E1-9c |
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| Kingdom | Archaea |
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| Replicon accession | NC_011832 |
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| Strand | - |
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| Start bp | 813145 |
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| End bp | 815565 |
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| Gene Length | 2421 bp |
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| Protein Length | 806 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 643569449 |
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| Product | AAA family ATPase, CDC48 subfamily |
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| Protein accession | YP_002465886 |
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| Protein GI | 219851454 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0464] ATPases of the AAA+ class |
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| TIGRFAM ID | [TIGR01243] AAA family ATPase, CDC48 subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.704818 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATAATTA TGGCAGATAA TGATTATGTC AACGTCGTGG TGAAGGAAGC CGCACGGGAT
GATGCCGGCC GGGGTATCGC ACGTGTCTCG ATGGACGTGA TGAGAGCGCT CGGATTCGTC
AGCGGGGATG TAATCGAGAT TCAGGGCAAG AGGAAGGCGA ACGCCATCGT CTGGCCGGGA
TTTCCGGAGG ACACCGGCAG AGGGATCCTC CGGATCGACG GGAACATAAG ATCCAATGCA
GGAACCGGGG TCGACGAGAC CGTCAGGATC AGGAAGGTGC AGGCCTCGGT CGCAACCAAG
GTTGTGATCC AGCCGACCCA GCCGATCCGG CTCGTCGGTG GCGAACAGTA CCTGAGGAGG
TTGTTGCATG GTCGGTCGGT GATGGAAGGG CAGAGTCTGC GGGTCGACGT GATCGGAAAT
CCTCTCACCT TTGTGATCGC CAAAGTCACA CCGAAGGGGA TCGTGGTCGT CACCGATGAG
ACCACCATCG AACTGAAGGA GACCCCCTAC AAACCGGAGG AGGGAAAGAA GGAAGCGGCG
ACGGCGGACA TCCACTACGA GGATATCGGC GGGCTCGGCC GCGAACTGCA GCAGGTTCGG
GAGATGATCG AACTGCCGCT CCGCCACCCG GAGATCTTTG AGAAGCTCGG GATCCAGCCG
CCCAAGGGGG TGCTGCTGTA CGGGCCGCCC GGCACTGGCA AGACGTTGAT AGCGAAGGCG
GTGGCCAACG AGGTGGACGC CCACTTCATC ACCCTTTCAG GTCCGGAGAT CATCTCCAAG
TACTATGGTG AGAGCGAGGG AAACCTCCGC CAGGTCTTCG AGGAGGCCCA GCAGAACGCC
CCGACGATCA TCTTCATCGA TGAGATCGAT TCGATCGCAC CCAAGCGGGA GGATACCAAG
GGCGAGGTCG AACGCCGGGT GGTCGCCCAG TTGCTCGCCC TGATGGACGG GCTGAAGGGG
CGTGGCGAGG TGATCGTGAT CGCGGCCACC AACCTTCCGG ATGCGCTCGA CCCGGCACTC
CGGCGGGGCG GCCGGTTCGA TCGAGAGATC GAGATCGGGA TCCCTGACCG GAACGGCCGG
GAGGATATCT TCAAGGTCCA CACCAGGGGT GTCCCCCTCG CCGAAGATGT GGACCTCAAG
GATCTCTCAG AGACCACGCA TGGATTCGTC GGTGCCGATA TCGCCCTGCT GGTCAAGGAA
GCCGCGATGC ACGCCCTTCG GAAGGTGATC CCGAAGATCA AGGATGACGA GGGGATCCCG
GACGAGGTGC TCGACCAGTT GAAAGTGACC AATGCCGACT TCACCGAGGC GAGAAAACAT
GTCGACCCGA GTGCGATGCG GGAGGTGCTG GTCGAGGTGC CGGACGTGAA GTGGGAGGAC
ATCGGCGGAC TCGAACAGGT GAAGAAGGAC CTGACCGAGA CGGTGGAGTG GCCGCTCAAG
TACGCGGACG TTTTTGAGAA GCTCGAGACC AGTGCCCCGA AGGGGATTCT GCTCTTCGGC
CCGCCAGGCA CCGGCAAGAC GATGCTGGCA AAGGCGGTCG CCAACGAGAG CCAGTGCAAC
TTCATCTCGG TGAAGGGGCC CGAACTCCTC TCAAAGTGGG TCGGTGAATC AGAAAAGGGG
GTCAGGGACA TCTTCAGAAA GGCCCGGCAG GCTGCTCCGT CGATCATCTT CTTCGACGAG
ATCGATGCCC TGGTGCCGTC GAGGGGATCC TACACGGGCT CCTCGCATGT GACCGAGAGT
GTGGTCAGCC AGATCCTGAC CGAGCTGGAC GGGCTCGAGG AACTGAAGAA CGTGGTGGTG
CTGGCAGCCA CCAACAGGCC CGACATGATC GACAAGGCGC TGATGCGGCC AGGCCGGCTC
GACCGGCACC TCTACGTCCC ACCGCCGGAC AGGGAGGGGA GGAAGAAGAT CTTCGAGGTC
TACCTGCGGC ATGCCGAGGC GATCCTCTCA GGGGATGTGA AGATCGACGA TCTGGTTGAG
AAGACCGAGA GGTTCGTGGG TGCAGACATC GAGGCACTGG TCAGGGAGGC GAAGCTCTCA
GCGATGCGTG AGTTCATCGG CGTAATGACC GGGAAGACCG AACTGGAGAG GACCGAAGCG
ATCGGGAACG TCAGGATCAC CGGAAAGCAT TTTGAGGACG CACTCCTTAA GGTCAACGGA
TCCCTGGACC GCGATACGAC CGAGCAGTCC GAACGGCAGT CCTGGGAGAT CCTCTTCAAC
CAGGACCAGA GGATGATCCT TGAGGATGCG GCCGCTGTCA TCAAGCGTGC CGAACTCAAA
GGGATCGGCA CCACGGTACC TGATAGCCAG AAGAGCGAGA TAGAAGATCT CAGAACAGCG
TTATACAGAC AGACGAAGGA CTTCGGTCTG ATCAAGGAGA GAACAGCACA GGTGAAGGGG
CACCTTGACG GGACCGGGTG A
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| Protein sequence | MIIMADNDYV NVVVKEAARD DAGRGIARVS MDVMRALGFV SGDVIEIQGK RKANAIVWPG
FPEDTGRGIL RIDGNIRSNA GTGVDETVRI RKVQASVATK VVIQPTQPIR LVGGEQYLRR
LLHGRSVMEG QSLRVDVIGN PLTFVIAKVT PKGIVVVTDE TTIELKETPY KPEEGKKEAA
TADIHYEDIG GLGRELQQVR EMIELPLRHP EIFEKLGIQP PKGVLLYGPP GTGKTLIAKA
VANEVDAHFI TLSGPEIISK YYGESEGNLR QVFEEAQQNA PTIIFIDEID SIAPKREDTK
GEVERRVVAQ LLALMDGLKG RGEVIVIAAT NLPDALDPAL RRGGRFDREI EIGIPDRNGR
EDIFKVHTRG VPLAEDVDLK DLSETTHGFV GADIALLVKE AAMHALRKVI PKIKDDEGIP
DEVLDQLKVT NADFTEARKH VDPSAMREVL VEVPDVKWED IGGLEQVKKD LTETVEWPLK
YADVFEKLET SAPKGILLFG PPGTGKTMLA KAVANESQCN FISVKGPELL SKWVGESEKG
VRDIFRKARQ AAPSIIFFDE IDALVPSRGS YTGSSHVTES VVSQILTELD GLEELKNVVV
LAATNRPDMI DKALMRPGRL DRHLYVPPPD REGRKKIFEV YLRHAEAILS GDVKIDDLVE
KTERFVGADI EALVREAKLS AMREFIGVMT GKTELERTEA IGNVRITGKH FEDALLKVNG
SLDRDTTEQS ERQSWEILFN QDQRMILEDA AAVIKRAELK GIGTTVPDSQ KSEIEDLRTA
LYRQTKDFGL IKERTAQVKG HLDGTG
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