| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpal_0793 |
|---|
| Symbol | |
|---|
| ID | 7270534 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanosphaerula palustris E1-9c |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_011832 |
|---|
| Strand | + |
|---|
| Start bp | 807328 |
|---|
| End bp | 808344 |
|---|
| Gene Length | 1017 bp |
|---|
| Protein Length | 338 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 643569441 |
|---|
| Product | DNA primase large subunit |
|---|
| Protein accession | YP_002465878 |
|---|
| Protein GI | 219851446 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG2219] Eukaryotic-type DNA primase, large subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.0232424 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.488052 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAGGTCC GGCTCGATAT CAAGGACCTT GCACGATACC CATTTTTAAA AGAATCACAG
CAGTATGTCG GGACGCAATC GGAGTCCCTC GACCAGTTTC TCGCCGGCAG CCAGGGGGGA
CTGGCGCTGG GGAAGGCCGC TGACCGGGTG AACCTGGCCA TCACTTTTCG CAGATCAAAG
GATGAAGGAG AGAAACGTCC TGAGGTCCCT GCGGACGATA TCCATGTGAA ACTTGAGATC
TTCAGTTACG GGCTCGCACG GGTGCTGGTC TCCTGCATGA AGGACCGGAC GCTGATCGAC
CGGCTGGCGA GGTATGAGGC ACGGCGCGCC GCCCAGTTCC TGGCTGATGA AGATCCTGAT
AAGAAGGCCT ACGTCGCAGA GAGCCTGGGG ATGGATCTCA ATGAGGCCCG GATGCCGCTG
GTCGCCTACG TCGACCTGGT CGCGCCGCTC CGGGACGAAC GGTGGCGCCT GGTGAACCGT
TCGGTGCATT CCGGGTCGGT CCTCCTCAGG GGTGATGATG AACAGAGGGA GATCGATGAA
CTGCTGGCCG AACGGATCCG CGTGGTGCTG CTCAGACAAC TTCCGCTTCA GGTTCCGCCT
TCGGTCTGTG AACAGGTCAG GCCGATCACC GAGCACCTGA ACGCCACCTA CCAGCAGCAG
ATGCTGCGGG ACCTCGGTCC GATCGACGAG GGACGGTATC CCCCCTGCAT CAGCGCCCTG
ATCACCGCGG TGACCGAAGG AAAGAATCTG ACCCATCCGG GGAGGTTTGC GATGACCGCT
TTTCTGCACA CAATCGGGAT GTCCTCGACC CAGATCGTCG AACTGTACTG TCGGGCACCC
GACTTCGACC TGCAGACCAC GATGTATCAG GTCGGACATA TCACCGGCGG AGGGGGTACC
GAGTACTCGC CGCCGTCGTG CGCCACGATG CAGACCAATG GGATCTGCAT CGGGAAGAAT
GCGCTCTGCT CCAGGGTGAG CAGCCCGCTC GGGTATTACC GGCGAAAGAA AGAGTGA
|
|---|
| Protein sequence | MQVRLDIKDL ARYPFLKESQ QYVGTQSESL DQFLAGSQGG LALGKAADRV NLAITFRRSK
DEGEKRPEVP ADDIHVKLEI FSYGLARVLV SCMKDRTLID RLARYEARRA AQFLADEDPD
KKAYVAESLG MDLNEARMPL VAYVDLVAPL RDERWRLVNR SVHSGSVLLR GDDEQREIDE
LLAERIRVVL LRQLPLQVPP SVCEQVRPIT EHLNATYQQQ MLRDLGPIDE GRYPPCISAL
ITAVTEGKNL THPGRFAMTA FLHTIGMSST QIVELYCRAP DFDLQTTMYQ VGHITGGGGT
EYSPPSCATM QTNGICIGKN ALCSRVSSPL GYYRRKKE
|
|---|
| |