Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mpal_0783 |
Symbol | |
ID | 7270524 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosphaerula palustris E1-9c |
Kingdom | Archaea |
Replicon accession | NC_011832 |
Strand | - |
Start bp | 797451 |
End bp | 798215 |
Gene Length | 765 bp |
Protein Length | 254 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 643569431 |
Product | F420-dependent oxidoreductase |
Protein accession | YP_002465868 |
Protein GI | 219851436 |
COG category | [S] Function unknown |
COG ID | [COG1478] Uncharacterized conserved protein |
TIGRFAM ID | [TIGR01916] F420-0:gamma-glutamyl ligase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.089836 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.0847335 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCAACCGA TCACCGTCCT TCCGGTGGAG GGCCTTCCTC TGATCAGAGC AGGGGATAAC CTCGAAAAGA TGATCACCGA TTCGATCCCC CTTCTGGACG GCGACATCCT GGTGATCGCC TCGACCGTCT ACTCCAAGGC GAAGGGAAAT ACCCGGGACC TCTCGACCAT ACAGCCAGGA GCACAGGCAG AGCATCTGGC AGCACGAAAC GGGGAAGATC CCCGGTTTGT GCAGGCGGTG CTGGATGCAT CAGAGGAACT GATCCTTGAA GAACCGTTCA TCCTCTCTGC CCTGACATGC GGGCATATCG GGGTCAGGGC CGGGGTCGAC CATTCCAACA TCGAGGATGG AAAGGTGATT CTGCTCCCAT CCGACCCGAT GGGCGCCGCA GCCGAGGTGC AGGAGCAGGT GCAGGCACTG ACTGGCAGGA AGATCCGGGT GATCATCACC GACACCTGCG GACGGTCCTT TCGACGCGGG CAGACGGGCC ATGCGATCGG CTGGAGCGGG ATGACCGCGA TCCGTGACTT CCGTGGGGAT ACCGATCTCT TCGGTCATGA ACTTGCAATC ACCGAAGAAG CCGTGATCGA TGAGATTGCA GGGTTCGCCA ACTTTGTGAT GGGCGAGAGC AACAACGGTG TGCCGGTGGT CGTTGTGAGG GGATGCGAGA CCTGGTCAGG ACACGACAAC CTGTACTTCA ACCGGAACGA AGATCTGACT CGAAGGGCGC TGACCAGTCA GGCTGCAAAT GAGCAGAAGG AATAA
|
Protein sequence | MQPITVLPVE GLPLIRAGDN LEKMITDSIP LLDGDILVIA STVYSKAKGN TRDLSTIQPG AQAEHLAARN GEDPRFVQAV LDASEELILE EPFILSALTC GHIGVRAGVD HSNIEDGKVI LLPSDPMGAA AEVQEQVQAL TGRKIRVIIT DTCGRSFRRG QTGHAIGWSG MTAIRDFRGD TDLFGHELAI TEEAVIDEIA GFANFVMGES NNGVPVVVVR GCETWSGHDN LYFNRNEDLT RRALTSQAAN EQKE
|
| |