| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpal_0778 |
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| Symbol | |
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| ID | 7270519 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosphaerula palustris E1-9c |
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| Kingdom | Archaea |
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| Replicon accession | NC_011832 |
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| Strand | - |
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| Start bp | 794140 |
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| End bp | 794775 |
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| Gene Length | 636 bp |
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| Protein Length | 211 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 643569426 |
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| Product | Proteasome, beta-type subunit, conserved site |
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| Protein accession | YP_002465863 |
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| Protein GI | 219851431 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0638] 20S proteasome, alpha and beta subunits |
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| TIGRFAM ID | [TIGR03634] proteasome endopeptidase complex, archaeal, beta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.24869 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.00720502 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTCAGAAG CAGAGACATT AAAAGGAACG ACAACCATCG GGATTGTTTT TAAAGACGGC
ATCATTCTCG CAACTGAGAA GCGTGCCACC ATGGGAAGTA TGATCGCAAG CAAGCGGGCG
AAGAAGGTAT ACCAGGTAGC AGACCGTATC GGAATGACAA CGGCCGGCGG CGTTGGGGAT
GCCCAGCAGC TGGCACGGAT CATGTCTGTT GAATGCAACC TGTACCAGAT CCGCCGCGGG
CGGTCCATCT CGGTCGGTGC ATCCTCGACG CTCCTGTCGA ACTATCTGAA CCAGAACCGG
GGCTACCCCT ACTATGTTCA GCTGCTGGTG GGCGGTGTCG ATGCGACAGG ACCGAGTGTC
TACTCGGTCG ACGCCATGGG CGGTGCGACC AGAGAGAGCG ATATCGTCGC TACAGGCTCC
GGTTCGCCGA TGGCCTACGG GGTTCTTGAG GACCGGTACA AGAAGGACCT CACTGAGGAT
GAGGCGATCG AACTCGCGAT CCGGGCACTT CGTGCAGCGA TGCGGCGGGA CTCGGCATCA
GGGGAAGGGA TCCATGTGGT GATCATCACC AAGGACGCAT ATTCAGAATT ATCTGAAGAA
CGGTTAGAGC AGTATACCGC TGCTGTCACC GCATAA
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| Protein sequence | MSEAETLKGT TTIGIVFKDG IILATEKRAT MGSMIASKRA KKVYQVADRI GMTTAGGVGD
AQQLARIMSV ECNLYQIRRG RSISVGASST LLSNYLNQNR GYPYYVQLLV GGVDATGPSV
YSVDAMGGAT RESDIVATGS GSPMAYGVLE DRYKKDLTED EAIELAIRAL RAAMRRDSAS
GEGIHVVIIT KDAYSELSEE RLEQYTAAVT A
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