| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpal_0771 |
|---|
| Symbol | |
|---|
| ID | 7270512 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanosphaerula palustris E1-9c |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_011832 |
|---|
| Strand | + |
|---|
| Start bp | 786721 |
|---|
| End bp | 787941 |
|---|
| Gene Length | 1221 bp |
|---|
| Protein Length | 406 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 643569419 |
|---|
| Product | CoB--CoM heterodisulfide reductase |
|---|
| Protein accession | YP_002465856 |
|---|
| Protein GI | 219851424 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0247] Fe-S oxidoreductase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 6 |
|---|
| Fosmid unclonability p-value | 0.0497692 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGCGGGC AGGACATCAG GAAGATCTGG TCCCGTCACT TCTCCCCCCT CCAGATGCTG
GAACTGGATG CCTGCACCCG GTGCCAGGAA TGCGTTGATG CCTGCCCGGT GGTCCGGGCG
GGTTATCCCG ATGGCGCGAT GGAACGAATA GCCGGCTGGA GGAGGCTTGT GACCCCGAAA
ACCAGGATTC TCTCCCGCTT GACCGGCACT CCCATCGTTG AAGATGGCGA GGCAGCACTC
TTCTCAAGTC TGTTCCGGTG TACCTCCTGC GGTGCCTGTT CCGTTGTCTG CGAATCTGGG
ATCGCCACAG TCCCGCTCTG GGAATCGATC ATGGGTGCAG GACGGGAGAT GGGATTTTTG
GATCCTGCGA TCGAGCAGAT GGCCCGTACT ATTATTGATA AAAAAAGCCC GTATGGCGAC
CCACGTGCAG ACCGGGTTGC ATGGATCCCG GCGGGAATCC CTGTTGCCGA TGCAGCGCCG
GTAGCGCTCT TTACAGGATG CACGGTAGCG TTCCGGCAGC CGGAGATCGG GCAGGCCGCC
CTGCGGATCC TTGCAAAATC CGGAACAGAA TTCTGCATGG TACAGGAGGA GTCCTGCTGC
GGTTCGTTCC TGTTTCGGAC CGGTTCGTCG GAGGAGTACG CGGGGACCAT CCGAGCCATG
ATCGAGGATC TCAGGGCCAG GGGTGTCAGA ACCCTTCTTG TCACCTGTGC CGGGTGCTTA
AAGACGATCA CGGTCGACTG GCCCCGCGTG TACGGGAAGG AGCTGCCGTT TGTGACCATG
CCGTTTACCG CATTTGTCCG TGAACTTATC CGGCAGAAGA AGATCCAGTT CAGACCCACA
CCGCACCTGC GGGTCGTGTA CCATGACCCC TGTCATGCCG GCAGGCACCT GGTGCACCAC
CTGGGACCTG ATCTGGCGTT TGAGGCGCCC CGTGATCTGC TCCGTGCAAT GCCGGGGGTC
GAACTTCTTG AATATGAGAA GAACCGGAAG AACCAGGTCT GCTGCGGTGC TGGCGGGGGC
ACCAAGACCC GGGACCCGGA GCTGGCCATC GCGATTGCAA AAGAGAAGAT TTCCGCTGCA
GACCGGATGG ATGCCGGTAT CCTCGCCTCG GTCTGCCCGT TCTGCCGGAG AAACCTTGAG
GATACGCGTG TTATTGTGGG ATCATCTATC GAGGTGCTCG ATCTCATCCA GCTGGTTGAC
CGGATGATGG ATTCCCCGTA A
|
|---|
| Protein sequence | MGGQDIRKIW SRHFSPLQML ELDACTRCQE CVDACPVVRA GYPDGAMERI AGWRRLVTPK
TRILSRLTGT PIVEDGEAAL FSSLFRCTSC GACSVVCESG IATVPLWESI MGAGREMGFL
DPAIEQMART IIDKKSPYGD PRADRVAWIP AGIPVADAAP VALFTGCTVA FRQPEIGQAA
LRILAKSGTE FCMVQEESCC GSFLFRTGSS EEYAGTIRAM IEDLRARGVR TLLVTCAGCL
KTITVDWPRV YGKELPFVTM PFTAFVRELI RQKKIQFRPT PHLRVVYHDP CHAGRHLVHH
LGPDLAFEAP RDLLRAMPGV ELLEYEKNRK NQVCCGAGGG TKTRDPELAI AIAKEKISAA
DRMDAGILAS VCPFCRRNLE DTRVIVGSSI EVLDLIQLVD RMMDSP
|
|---|
| |