| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpal_0763 |
|---|
| Symbol | |
|---|
| ID | 7270504 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanosphaerula palustris E1-9c |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_011832 |
|---|
| Strand | - |
|---|
| Start bp | 776244 |
|---|
| End bp | 776777 |
|---|
| Gene Length | 534 bp |
|---|
| Protein Length | 177 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 643569411 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002465848 |
|---|
| Protein GI | 219851416 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3247] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.0552714 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.074634 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACAGCTG TTGTCGGCAG CATGTCATGG TGGCTCATCT TGATCTGGGG AATAATGGCA
TTGATCGTCG GGCTCATGCT GGTCACAACG CCACTGGCCA CCGCCTTTAC CTTGATCCTC
TTCATCGGAG TATACTGGTT AATTGGAGGT ATTTTTACCC TGGCGAGTCT CTTCACGGAC
CGATCGAATT GGGGATGGAA GACATTCCTG GCAGTTATCA GTATAATAGC CGGAATTGGT
ATCATGTCGT ACCCGATTTA CAGTTCGCTT CTGGTCCTGA CGGTGTTTAC CACCCTGATT
GGATTCTGGG GGCTTCTTAT CGGAGGTACC AAGTTATACG AAGCCTTCGT AAAGAAGGAT
GCCGGGGCAG GTGTTCTTGG TCTGCTGAGC ATCATTTTCG GTTTCATCCT CCTCGCCTAC
CCCTATGCAG GAGCAATCGC ACTCCCCTTT ATTGCAGGGA TCTTTGCGAT CTTGGTAGGA
ATATCCACGA TATTCGTTTC GTTCCTTATC AAAAAAGCAC AGGCTTCACT GTAA
|
|---|
| Protein sequence | MTAVVGSMSW WLILIWGIMA LIVGLMLVTT PLATAFTLIL FIGVYWLIGG IFTLASLFTD
RSNWGWKTFL AVISIIAGIG IMSYPIYSSL LVLTVFTTLI GFWGLLIGGT KLYEAFVKKD
AGAGVLGLLS IIFGFILLAY PYAGAIALPF IAGIFAILVG ISTIFVSFLI KKAQASL
|
|---|
| |