| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpal_0740 |
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| Symbol | |
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| ID | 7270475 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosphaerula palustris E1-9c |
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| Kingdom | Archaea |
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| Replicon accession | NC_011832 |
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| Strand | - |
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| Start bp | 742233 |
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| End bp | 742964 |
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| Gene Length | 732 bp |
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| Protein Length | 243 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 643569384 |
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| Product | Xylose isomerase domain protein TIM barrel |
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| Protein accession | YP_002465827 |
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| Protein GI | 219851395 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1082] Sugar phosphate isomerases/epimerases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.103383 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCAACCCG AACAGAGCAG CCAGTATGGC ATCTCGTCCT ACTGCCTCCA CAGCCTGCCG
CTTACGCAGG CACTCGAACA GTTGTCGACG ATCACCAACT ATGTCGAGGT GATGGACGAC
GGCCCTCACC TGATCGCCAG TGCAGAGCCG CTGGAGAGTT TCTCGCTGAA GTATGCCCTC
CATGCCCCAT CCCGAGGGGT GAACATCGCG AGTCTGCTTG AGCCGATCCG GCAGGCGAGT
GTCGAGGTGC TCGGGGACTG CTTCGCCATC GCAGCCGAGG TGAACGCCCC GGTGGTGGTC
CACCCCGGGT ACTTCGCCTG GACACAGGAG TATGAAGCAG CCGCCAGGCA GTTCGAGACC
TCGGTCAACG ATCTGATCCA TCTCTCCGAG GAGCACGGGG TCACCTTCTT CATCGAGAAT
ATGGGCAACT GGGACTACTT CTTCATCCGG ATCCCCTCGG AACTTCCGCT CCCCGACGGG
ATCGGGCTGG CCCTCGATGT GGGGCATGCC AACCTGAACC ACTGCCTGAA AGGATTCCTC
TCCCGGACGA TCGGTCACTT CCACCTCCAT GACAACAACG GGAAGGAGGA TCAGCATGCG
GCCTTCGGTG ACGGGACGAT CGACTTCTCA GCCGTGATGG CCTCGGTCCG GAGAAACAAT
GTCCGGCCGA TCATAGAAGT TGGAACGTAC GAAGGGGTCC TTACCAGCAT CGAGGCGCTC
AAAGGGCTCT GA
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| Protein sequence | MQPEQSSQYG ISSYCLHSLP LTQALEQLST ITNYVEVMDD GPHLIASAEP LESFSLKYAL
HAPSRGVNIA SLLEPIRQAS VEVLGDCFAI AAEVNAPVVV HPGYFAWTQE YEAAARQFET
SVNDLIHLSE EHGVTFFIEN MGNWDYFFIR IPSELPLPDG IGLALDVGHA NLNHCLKGFL
SRTIGHFHLH DNNGKEDQHA AFGDGTIDFS AVMASVRRNN VRPIIEVGTY EGVLTSIEAL
KGL
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