| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpal_0689 |
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| Symbol | |
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| ID | 7271834 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosphaerula palustris E1-9c |
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| Kingdom | Archaea |
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| Replicon accession | NC_011832 |
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| Strand | + |
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| Start bp | 684697 |
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| End bp | 686625 |
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| Gene Length | 1929 bp |
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| Protein Length | 642 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 643569334 |
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| Product | ATPase |
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| Protein accession | YP_002465779 |
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| Protein GI | 219851347 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1855] ATPase (PilT family) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00061638 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.134413 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACTGG TGCCCGATAC GAGCGTCGTT ATTGATGGAC GCATCACATC TATGATAAAA
AAGGGAGAAT ATGCCGGCGC TACAATAATA ATACCCGAAG CGGTGGTGGC TGAACTTGAG
TCGCAGGCGA ATCAGGGACG AGAGATCGGG TTCAGTGGAT TGACTGAACT CCAGCAACTC
TGCAAAATGG CAGAGCAGAA ATTGATAGAA ATACAGTTCG TGGGTGTCAG GCCGACGCTC
GAACAGGTGA AACTGGCCAG TGGTGGAGAG ATTGATGCAA TGATCCGAAA CGTGGCAATA
GAACATAACG CAAAGTTCAT CACCAGTGAC AGTGTGCAGT CTGAAGTGGC CAGGGCCAAG
GGGCTTGATG TTCAATATAT GAAACCGCAG ATCGGCGACT TCACCCCCCT CGGCATCGAC
CAGTACTTCG ATGAACAGAC ACTGGCAGTC TACCTCAAGG AACGAGTCCC CCCCTATGCT
AGGAAGGGAT CGATCACCGA AAAGCGGCTC GTCCGGATCA GGGATCAGCC ATCCAGCGAG
TATGAACTGA TCGGACTGGC ACGAGAGATC CTTGAGCGTG CAAAGCGGGA TCCAGATGGA
TTTGTGGAAT CTGAAGGACG CGGGATCACG GTCGTGCAGA TTGGTTCGAT GCGGATTGCC
ATCGCTCGCC GCCCCTTCTC AGATGGGATG GAGATCACGG CGGTCCGTCC TGTAGTCGAT
ATATCGCTGG AGAATTATCG GAAGGCACAC CTTGTAAAGA ACAGGCTGGC CGATGAGAAA
CGGGGTGTAC TACTGGCTGG GGAACCCGGA GCAGGCAAGA CTACGTTGGT TCAGAACATC
GCCATTCACC TCTCTGATCG GGGATCCGTA GTCAAGACGA TGGAGGCCCC ACGGGATATG
CAGGTGCCTG ACCTGATCAC TCAGTACACA GCCCTGGATG GCAGTATGGA GAAGACAGCC
GAGATGCTGT TGCTGCTCAG GCCTGATTAT GTGATCTATG ACGAACTTCG GAAACATGAG
GACTTTCGAA TCTTCTCAGA CATGCGGTTG ACCGGGGTCG GGATGATCGG TGTACTCCAT
GCGGAGAACG TCCACGCCGC CCTGCAGCGA TTTTCGGACC GGGTGGACTT TGGTGTTCTT
TCACAGGTAG TGAACTCGAT CATCTTTGTC AGTGACGGGG ATATCAGTAG CATCTATGAC
CTGAGTTTCG GGCTGAAGGT TCCTGCCTCG ATGCCGGCGG AGACCCGGCA TCTACCGGTG
ATCACGGTCA CCGACGCTGA GACTGGTGGG CTGGTGCTCG AGATCTTCAG GACAGAAGGT
GAGACGGTCA TCATGCCGGT AAACCTCGGT GTTACCCCAC AAAAGGAGAC GGTCCCCGAA
CTGGTGGGTC CTCTGGAACC AGTAGAGGAA CCTGTGCTCG AAGAGGCGGA GATCGAGCCG
GAGACCTATG AGGAGAAGCC GGCTTGGCGG ATGGTCGCCA AGGATATCCA GCGCGAGATC
GGCAGGTACA CCGACGGTTC GGTTGAAGTG AAGATGATCA GCGACAGTAA GGCCGTCGTG
TACATCGAGG ACAAGGACGT TCCTGCGGCG ATTGGAAAGG GTGGAAAGAA TGTCGCCTCC
ATTGTGAACA AGGTCGGTGT CGGGATCGAT ATCCGGCCCC TGACTGAACT GGAGGTGGCA
CGTCCGGTGG TGGAAGAGGT TCTCCCTGTT GAGGGAGGGA TCCGGATCCG GACGGATAGA
AAGCACCTCT CGATCATCTC GTCTGAGCAG AGCGGGAAGA TCGTCGATGT CTTTGCCGGC
AAGGAGTATC TCTTCACAGC GACCGTCAGC GAAGCCGGAG AGATCCACCT GGCCAAGAGC
AGCACGATCG CACAGGAGAT GCTGAAACGG TACACGAATG GAGAGATGAT ACGGATGAGG
CCGGTATAA
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| Protein sequence | MKLVPDTSVV IDGRITSMIK KGEYAGATII IPEAVVAELE SQANQGREIG FSGLTELQQL
CKMAEQKLIE IQFVGVRPTL EQVKLASGGE IDAMIRNVAI EHNAKFITSD SVQSEVARAK
GLDVQYMKPQ IGDFTPLGID QYFDEQTLAV YLKERVPPYA RKGSITEKRL VRIRDQPSSE
YELIGLAREI LERAKRDPDG FVESEGRGIT VVQIGSMRIA IARRPFSDGM EITAVRPVVD
ISLENYRKAH LVKNRLADEK RGVLLAGEPG AGKTTLVQNI AIHLSDRGSV VKTMEAPRDM
QVPDLITQYT ALDGSMEKTA EMLLLLRPDY VIYDELRKHE DFRIFSDMRL TGVGMIGVLH
AENVHAALQR FSDRVDFGVL SQVVNSIIFV SDGDISSIYD LSFGLKVPAS MPAETRHLPV
ITVTDAETGG LVLEIFRTEG ETVIMPVNLG VTPQKETVPE LVGPLEPVEE PVLEEAEIEP
ETYEEKPAWR MVAKDIQREI GRYTDGSVEV KMISDSKAVV YIEDKDVPAA IGKGGKNVAS
IVNKVGVGID IRPLTELEVA RPVVEEVLPV EGGIRIRTDR KHLSIISSEQ SGKIVDVFAG
KEYLFTATVS EAGEIHLAKS STIAQEMLKR YTNGEMIRMR PV
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