Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mpal_0667 |
Symbol | |
ID | 7271811 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosphaerula palustris E1-9c |
Kingdom | Archaea |
Replicon accession | NC_011832 |
Strand | - |
Start bp | 660766 |
End bp | 663555 |
Gene Length | 2790 bp |
Protein Length | 929 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 643569312 |
Product | PAS/PAC sensor signal transduction histidine kinase |
Protein accession | YP_002465758 |
Protein GI | 219851326 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG4251] Bacteriophytochrome (light-regulated signal transduction histidine kinase) |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGCGTC ATCACCCGTT CGACTCCGCG ACGACGAACG TCAACCAGCG GAAGATCATC AGTCTCCTCA TCGTCCCTTC GTACCTCGTG ATCATCGCGC TCCTCTTCCT CACGGACAGA ACGGCTGTCT TTGCCCAGCC CCTCCTCCTC CTGCTCCTGA ACTCGATCTT CCTCGGCCTG ATCCCCCTGT ACGTCGCATA TGTCTCGGTT TTATCGTTTC AGCGCAGCGG TCTCGTCAAT ATCCTGATGA TGGGCGCCGG GATGCTCTTC CTTGGCCTGG GTGCCATCGC CACAGGACTG GTCGGGCTCC TGCCGGATTC ATCCAATATG AGCATCACTA TCTTCAACCT CAGCGCCGGA ATCAGCGCCT TTCTCCAGTT TGCTGGCGCG CTGATAGCGC TGGTCGGCTG GACCTTCCGA CCGGCCGGGC GCCGAACGGT GATCGCAGCA ACGGTGTACG GAGTGGTCGT CACGGGGTCC GCCGGGTTCA TGCTCGCCGC CCTCCTGGGG CTGACCCCGA CGTTCTTTGT CCCGGGCTCC GGCTCGACGA TCTTACGCGA CTTCGTCCTC GCTGGCGGGA TCGAATTCCT CCTGCTCGCA TCAGGGCTGT TCTTTGTACT GTTCCGGAAG CGTGACGAGG ATTTCTTCTT CTGGTATTCC ATCGGTATGG CGATGATCGG CCTCGGCCTC CTTGCCGCGA CCATCATCAT GGTCTTCGAC GGTCCGCTCA ACTGGGCTGC TCGGATCGGG GAGTATCTCG GAGCCTGTTT TATTCTCGTC GCGTTCATGG CGCTCCAGCA TCGGGCGTCG ACCGGGAACG TCTCAGACCA GGAGATGCTC ACGAGGTTCT TCGCCGAGGC TGAAACCAGG TACCGGCAGT TGATCCAGAC AGCCGTCGAC GCCATCATCG TCCTCGATCC TGCATTTCGG GTCATCCTCT GGAATACCGG TGCTGAACGC CTGTACGGGT ATACATCAGA GGAAATGGTC GGCAGCCCAA TCTCCTGCAT CTTCCCCTTC GAACAAAAGG AAGAGATACT CCACCAACTG GAAAAAATCA GACAGGGGGA GACGATCGAG CGTGTTGAGA CCGAACGGGT CACAAAAGAC GGTTCACGCC GACTGATCTC CCTTTCACTC TCTCCAATCC TGAGCAGTGA TGGGGATTTT ATTGGGATAT CAGACATAGC CCACGATATC ACCGAGCGCC AGCGGTTCCA GAATGAGATC CTGAAGGCAA AGAACCGGTG GGAACGAACC TTCGACGCCG TTCCGGATAT GATCGCCATC GTCGACAAGC ATTTCCGGAT CGTTCAGGTG AACAGGGCGA TGGCCGACAG TATTGGTATT TCGCCCGAAG AGGTAGTGGG GATGACCTGT TATGAAGTTA TTCATCACTC CAGCACCCCC CCGACCATAT GTCCACACCA GAAACTCCTC CAGGACTACC AGAGTCATTC AACGGATTTG CATGAGGATA CCTCGAACAA GGACTTCTTC CTGACCGTAT CTCCAATCCA GGATCCTCTG GGTAACGTCC GCGGAAGCGT TCATATCCTC CGGGATATCA CCGAGCGAAA GCGTGCAGAA GAGGCTCTGA TCCGTTCAAA CGAGGAACTC AACGAACTCA ACGAGGAGCT CACCGCCACC GAGGAGGAGA TGAAGATGAA CAACGAGGAA CTCATGACCG CCGAAAAGAT GCTCCGCGAG AGCGAGGCGC GCCTCGCCCT TGCCCTCGAC ATCTCCGGGA TGGGGACGTT GGACTGCGAC ATGGTCAACC ACACCTCATG GCGGTCCCTC CGACACGACC AGATCTTCGG GTACAAGACG CCACCATCCA CCTGGAACCT GAAGATCTTC ATCGACCACG TTCTTCCTGA AGACCAGGAG ATGGTCAGGA AGATTTTTTC CGATGCCTTC GCAAGCCAGA GCGACTGGCG CTTCGAATGT CGGATACGAC GGACTGACGG CGAGATCCGA TGGATCGAAA AGACAGGTCT GGGACAGTAC GACGATGCCG GGCGTCCGCT CCGGGTACTC GGACTTCTCC TGGACATCAC CGAGCGAAAA CAGTTCGAGA CAACCCAGAA AAAGTATGCC GAGAAACTGA TGGCAAGCAA CGAGGAACTG CAACGGTACG CCTACGTGGC GAGCCACGAT CTCCAGGAGC CACTGCGCTC GATCGTCAGT TTCAGCCAGC TCCTCGATCG CCGATATAGG GGGAAGCTCG ATAAGGACGC CGACGAATAC ATCAAGTTTA TCGTCGATGG CGGGGTGCGG ATGCAGGCCC TGATCAAAGA CCTGCTCCAG GTCTCCCGGA TCGAGACACA GGCACAGCCG CTCGCCCCCA CCGACGCGAA TGCAGTGGTC GCCGATTCCA TTCGCTCGCT TAAAACACCA ATCCATGATA ACAATGCCAG GGTGACCGTC GACCCGCTGC CGATCGTCAT GGCCGATCCG TCACAGCTCG AACAGATCTT CACAAACCTG ATCGGGAATG CGATCAAGTA TCATCGTCCA GAAATGCCGC CAGCGATCAC CGTATCAGCA GAGCGACACG GCAACTGGTG GGAGTTCTCA GTCAGGGATA ATGGGATCGG GATCAAGGCT GAGTTCTTCG ACCGAATCTT CGAGATGTTC CGCCGGCTCC ACACGATCGA CGAGTACGAG GGGACCGGGA TCGGACTTGC GATCGTCAAG AAGATCGTCG AACGACACGG AGGCCGGATC CGGATCGAGT CAGAGCTGGG TGAGGGGAGT ACATTCTTCT TCACGCTGCC GGTGGTGTAA
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Protein sequence | MARHHPFDSA TTNVNQRKII SLLIVPSYLV IIALLFLTDR TAVFAQPLLL LLLNSIFLGL IPLYVAYVSV LSFQRSGLVN ILMMGAGMLF LGLGAIATGL VGLLPDSSNM SITIFNLSAG ISAFLQFAGA LIALVGWTFR PAGRRTVIAA TVYGVVVTGS AGFMLAALLG LTPTFFVPGS GSTILRDFVL AGGIEFLLLA SGLFFVLFRK RDEDFFFWYS IGMAMIGLGL LAATIIMVFD GPLNWAARIG EYLGACFILV AFMALQHRAS TGNVSDQEML TRFFAEAETR YRQLIQTAVD AIIVLDPAFR VILWNTGAER LYGYTSEEMV GSPISCIFPF EQKEEILHQL EKIRQGETIE RVETERVTKD GSRRLISLSL SPILSSDGDF IGISDIAHDI TERQRFQNEI LKAKNRWERT FDAVPDMIAI VDKHFRIVQV NRAMADSIGI SPEEVVGMTC YEVIHHSSTP PTICPHQKLL QDYQSHSTDL HEDTSNKDFF LTVSPIQDPL GNVRGSVHIL RDITERKRAE EALIRSNEEL NELNEELTAT EEEMKMNNEE LMTAEKMLRE SEARLALALD ISGMGTLDCD MVNHTSWRSL RHDQIFGYKT PPSTWNLKIF IDHVLPEDQE MVRKIFSDAF ASQSDWRFEC RIRRTDGEIR WIEKTGLGQY DDAGRPLRVL GLLLDITERK QFETTQKKYA EKLMASNEEL QRYAYVASHD LQEPLRSIVS FSQLLDRRYR GKLDKDADEY IKFIVDGGVR MQALIKDLLQ VSRIETQAQP LAPTDANAVV ADSIRSLKTP IHDNNARVTV DPLPIVMADP SQLEQIFTNL IGNAIKYHRP EMPPAITVSA ERHGNWWEFS VRDNGIGIKA EFFDRIFEMF RRLHTIDEYE GTGIGLAIVK KIVERHGGRI RIESELGEGS TFFFTLPVV
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