| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpal_0662 |
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| Symbol | |
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| ID | 7271806 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosphaerula palustris E1-9c |
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| Kingdom | Archaea |
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| Replicon accession | NC_011832 |
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| Strand | - |
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| Start bp | 656508 |
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| End bp | 657866 |
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| Gene Length | 1359 bp |
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| Protein Length | 452 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 643569308 |
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| Product | tryptophan synthase subunit beta |
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| Protein accession | YP_002465754 |
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| Protein GI | 219851322 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1350] Predicted alternative tryptophan synthase beta-subunit (paralog of TrpB) |
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| TIGRFAM ID | [TIGR01415] pyridoxal-phosphate dependent TrpB-like enzyme |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGACTA AGATCCTTCT CGATGAGGAG CAGATTCCCA AGCAATGGTA TAACGTCCAG
GCAGACCTGC CGTCCCCCCT GGACCCGCCG CTGAACCCCA GGACCCAGAA GCCGATCGTC
CCTGAGGATC TCTCAGCCAT CTTCCCGATG GAACTGATCC GGCAGGAGGT CACCACCGAT
CGGTATGTCG ACATCCCTGA GGAGGTGCGG GACGTTTTCA GGCTCTGGAG GCCGACCCCC
CTGTACCGGG CCCACCGGCT GGAGAAGTTC CTGAAGACAC CGGCGAAGAT CTACTACAAG
TGGGAAGGGG TCAGCCCGGC AGGAAGCCAC AAGGTGAACA CCGCGGTTCC GCAGGCCTAC
TACAATATGA AGGCTGGGGT CGAGCGGATC GCATCCGAGA CCGGAGCAGG ACAGTGGGGA
TCCTCCATCG CCTTCGCGAC GATGCTCTAC GACATGGACT GCACCATCTA CATGGTCAGG
TCGAGCTATG AACAGAAGCC GTACCGGAAG TCGATGATGC GTGTCTGGGG TGCCGAGTGC
ATCCCCAGCC CGAGCACCAG GACAGAATCC GGCCGGACCG TCCTTAAGAA GGATCCCGAT
ACCCCCGGCA GCCTGGGGAT CGCCATCTCC GAGGCGGTCG AGGACGCGGT CAACCATGAG
AAGACCAACT ACGCGCTCGG TTCGGTGCTG AACCATGTCT GTCTCCACCA GACCGTGATC
GGACTCGAGT GCCGCGAGCA GCTGGCGATG GTCGACGACT ACCCCGACGT CGTGATCGGG
TGCGTCGGCG GGGGGACCAA CTTCGCCGGG ATCTCGTTCC CGTTCGCAGG GGACAAACTG
ACCGGTAAGC ATCCGGACAT CGATATCATC GGTGTCGAGC CGGCCTCCTG TCCGACCCTG
ACCAGGGGAC TGTACACCTA CGACCTCGCA GACGAAGCCG GGTATACCCC GCTGCTGAAG
ATGTTCACCC TCGGGCATGA CTTCGTGCCC CCGTCCATGC ACGCCGGCGG CCTCCGGTAC
CACGGGGACT CGCCGATCGT CTCAAGGCTG GTGCACGACG GCGTGATGCG GGCCGTAGCC
TACCACCAGA GCGAGGTCTT CGACGCAGCC CAGACCTTCG CCCGCACCGA AGGGATCATC
GTCGCCCCCG AGACCTCCCA CGCCGTAAAA GGGGCCATCG ACGAGGCGCT GAAGTGCAGA
CAGACCGGGG AATCCAAGAC GATCCTCTTC AACTGCTCGG GCCACGGCAA CTTCGACATG
TCGGCGTATG ACGCCTACTC TGCAGGCACC CTGGTGGACT ACGAGTACCC GGACGCCCTG
ATCAAGGAAG CGCTGGACCG GATTCCAAAG ATCGCCTGA
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| Protein sequence | MQTKILLDEE QIPKQWYNVQ ADLPSPLDPP LNPRTQKPIV PEDLSAIFPM ELIRQEVTTD
RYVDIPEEVR DVFRLWRPTP LYRAHRLEKF LKTPAKIYYK WEGVSPAGSH KVNTAVPQAY
YNMKAGVERI ASETGAGQWG SSIAFATMLY DMDCTIYMVR SSYEQKPYRK SMMRVWGAEC
IPSPSTRTES GRTVLKKDPD TPGSLGIAIS EAVEDAVNHE KTNYALGSVL NHVCLHQTVI
GLECREQLAM VDDYPDVVIG CVGGGTNFAG ISFPFAGDKL TGKHPDIDII GVEPASCPTL
TRGLYTYDLA DEAGYTPLLK MFTLGHDFVP PSMHAGGLRY HGDSPIVSRL VHDGVMRAVA
YHQSEVFDAA QTFARTEGII VAPETSHAVK GAIDEALKCR QTGESKTILF NCSGHGNFDM
SAYDAYSAGT LVDYEYPDAL IKEALDRIPK IA
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