Gene Mpal_0648 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpal_0648 
Symbol 
ID7271792 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosphaerula palustris E1-9c 
KingdomArchaea 
Replicon accessionNC_011832 
Strand
Start bp643657 
End bp644871 
Gene Length1215 bp 
Protein Length404 aa 
Translation table11 
GC content60% 
IMG OID643569295 
ProductCystathionine gamma-synthase 
Protein accessionYP_002465741 
Protein GI219851309 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0626] Cystathionine beta-lyases/cystathionine gamma-synthases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGAAA AAACTGCTCC CCGTCGGGGA CTGATGACCG ATGCGATCCA TGCGGGGGAG 
ACCCCCGATC CTGTGACCCG GGCATCGGCC CCCGGTATTG TAATGTCGAC TGCATTCCTT
GCCGATGCCG GCGCTTCGTT CTCTGCTGAA GACTTCGGCG ATGAGACCCC GTACCTGTAC
ACCCGCTGGA AGAATCCGAC CGTCGACCAG CTCGAACAGA AACTCGCCGT CCTCGAGGGG
GCGGAGGCGG CCGTGGCTTT TGGAAGCGGC ATGGCCGCCA TCACGGCCCT GCTCCTGTAC
AACCTCTCTG CAGGGGATCA TCTCGTCATC AGTGACGTCT CCTATGCAGC AACTGCAGAG
ATGACGGACG AACTGATCCC ACGTCTGGGT ATATCGGTCA CCAAGGTCGA CATGTCTGAC
CCGGAGAATG TCCGGAATGC GCTCCGCCCG AATACCCGGC TCATCTATGC AGAGACTCCG
GCGAACCCGA TCATCCGCCT GACCGATGTT GAAGCCATCG CAGCCATCGC ACGGGAGAAC
GGATCGAAGT TCGCCGTGGA TGCCACCTTC GCTTCCCCCC TGGGTATCCA CCCGCTCGCC
CTTGGAGCGG ATTATGTGAT CCATTCCCTG ACCAAATATG TCTGCGGCCA TGGTGACGCC
ATCGGCGGTG CGGTCCTTGG GAATAAGATG GACATGGCCG GCATCAAGAA GGGGATCGCG
ATCCGGACCG GCGGGATCCT GAGTCCGTTC AATGCCTGGC TGATCCAGCG GGGTGCGTCT
ACCCTTCCCC TCCGGATGAA GGCCCATGAA GAGGGAGCCC TGATCGTTGC ACAGTTCCTC
GAAGATCATC CGAAGGTGAC CCGGGTCATC TATCCGGGTC TTGCTTCGCA TCCCCAGCAT
GCGCTGGCCA GCCGGCAGCT CGAGAATTTC TCCGGAATGC TGACATTCCA AGTCGCAGAC
GGAGCAAAGG CCGCAACGAT CATCGCCGAC CGGCTTTCGA TCATCCATTA CGCGGTCTCG
CTCGGTCATG TGCGGAGCCT CGTCTTCTAC CTCTCCACCG ACGAGATGCT CAGGACTTCC
TTCCGGATGA CGCCGGCACA GGAACAGTCG TACCGGGAGT TTGCAGGTGA TGGAATCTTC
CGGCTCTCGG TCGGTCTTGA GGATCCACAG GATCTCATTG CAGATCTCGA GTACGCCCTT
GCAGGGATTC CGTGA
 
Protein sequence
MTEKTAPRRG LMTDAIHAGE TPDPVTRASA PGIVMSTAFL ADAGASFSAE DFGDETPYLY 
TRWKNPTVDQ LEQKLAVLEG AEAAVAFGSG MAAITALLLY NLSAGDHLVI SDVSYAATAE
MTDELIPRLG ISVTKVDMSD PENVRNALRP NTRLIYAETP ANPIIRLTDV EAIAAIAREN
GSKFAVDATF ASPLGIHPLA LGADYVIHSL TKYVCGHGDA IGGAVLGNKM DMAGIKKGIA
IRTGGILSPF NAWLIQRGAS TLPLRMKAHE EGALIVAQFL EDHPKVTRVI YPGLASHPQH
ALASRQLENF SGMLTFQVAD GAKAATIIAD RLSIIHYAVS LGHVRSLVFY LSTDEMLRTS
FRMTPAQEQS YREFAGDGIF RLSVGLEDPQ DLIADLEYAL AGIP