Gene Mpal_0643 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpal_0643 
Symbol 
ID7270230 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosphaerula palustris E1-9c 
KingdomArchaea 
Replicon accessionNC_011832 
Strand
Start bp637996 
End bp639465 
Gene Length1470 bp 
Protein Length489 aa 
Translation table11 
GC content52% 
IMG OID643569290 
ProductRadical SAM domain protein 
Protein accessionYP_002465736 
Protein GI219851304 
COG category[C] Energy production and conversion 
COG ID[COG1032] Fe-S oxidoreductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.83222 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCGGG TCGTCTTTGT CAACCCCCTC GATTCGTCCA TTACAACAAC AGGCCTCGGC 
CTCAAAGCAC CGCCTCTGAA TCTTATGTAT CTTGCCGGTG CGGTTGAACA GGCAGGATTC
TCCCCCAGTA TCGTTGACGC GAATCTCCTC AATGCCCCCC CGGAGAAGAT AACAGAGATC
GTAGCACGGC TGCATCCTGA CCTGGTCGGT CTGACGGCTA CAACAGCAAC GATCTCAAAG
GCGTTCCAGT ACGTCAGGAA AATTCGTGAT GCGGTACCTG AGTGTTTTAT TTTCATAGGT
GGCCCGCATG TTACCTTCCT CCCCTCTGAG ACCCTTGCCG AATGCCGCGA ACTCAATGCC
GTCGTCATCG GAGAAGGTGA GGAGACAGTC GTTGATCTGG TCACGTCATT CTCCATGACC
GACCCTCACT GGCCGGAAAC GGTTCGGGGG ATTGCGTACA GGCGTAATGA CGGAGATAGG
GAACGGATCG TCGTCACACC GGCAAGAGAA TTGATTCAGA ATCTGGATGC ATTGCCGTTT
CCCGCCCGTC ATCTGGTCCC ATTCAACGAA TACAAACTGT TTGACAAGGA TGCAACAATC
GGATATATGA TCACCAGCCG TGGCTGCACG TTTGCCTCCA ATTACTGCTC CTCCTCGCAC
CTGATGGGTG GGATGTTTCG GGCGCGGTCT CCAAAAAATG TGGTTGACGA GGTGGAGGAA
CTCGTTTCAA CCTACCATGT GGACACCATT GAGTTTCTTG ATGACAATTT TATGCTCAAT
CGTTCCCGGG CCATCGATAT CGCCCATGAA ATTCGATCGA GGGGACTTGA TATCTCCTTC
GTCGCCTCTT CCCGGGTGAA CGCGGTCAAT CGCGATCTGT TGATGGAATT AAAAAAGGCC
GGTCTCTCTA CAATATATTA TGGTGTCGAA TCGGGTTCTT TGCGCACCCT GAAGTTGATG
AACAAGCGAA TCACGTTATC CATGGCTGAG GATGCGGTCA GGATTGCAAA AGACTGCGGT
ATCAGCGTAC TCACCTCGTT CATTATCGGG TATCCTGGGG AAACGTATGA GGATATGAAT
GCAACAATCA GGTTTGCGAT CCGTCTCGAC CCCGATTATG CACAGTTCAC CATTCTCACC
CCGTACCCGG GAACCCCGAT ATTTCAGGAA TTGAAGAAGA ACAACCTCCT AGCCACTGAA
GATTGGGACC GCTACACTGT ACTTGAGCCC ATTATTCGAT ACGAAGCGTA CGGGCTGACT
TCGCGGAAGA TCTCCCGCAA GCTCAAGGAG GCATATCTGC GGTTTTACCT GCGTCCAGGA
TACCTGTTCA GGCGGTCCGG TCTTTTAAAA ACTGTACTCT ATACCCTGTA CCACAGTTAC
TTCCGACCTG CATTCCTGCA CTCCGATCCT CAGGGTTGGT ACCGTAATTT TCCTGGCAAC
GAGCTCTCGG ATTGCGAGAA GGGGACATAA
 
Protein sequence
MTRVVFVNPL DSSITTTGLG LKAPPLNLMY LAGAVEQAGF SPSIVDANLL NAPPEKITEI 
VARLHPDLVG LTATTATISK AFQYVRKIRD AVPECFIFIG GPHVTFLPSE TLAECRELNA
VVIGEGEETV VDLVTSFSMT DPHWPETVRG IAYRRNDGDR ERIVVTPARE LIQNLDALPF
PARHLVPFNE YKLFDKDATI GYMITSRGCT FASNYCSSSH LMGGMFRARS PKNVVDEVEE
LVSTYHVDTI EFLDDNFMLN RSRAIDIAHE IRSRGLDISF VASSRVNAVN RDLLMELKKA
GLSTIYYGVE SGSLRTLKLM NKRITLSMAE DAVRIAKDCG ISVLTSFIIG YPGETYEDMN
ATIRFAIRLD PDYAQFTILT PYPGTPIFQE LKKNNLLATE DWDRYTVLEP IIRYEAYGLT
SRKISRKLKE AYLRFYLRPG YLFRRSGLLK TVLYTLYHSY FRPAFLHSDP QGWYRNFPGN
ELSDCEKGT