Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mpal_0643 |
Symbol | |
ID | 7270230 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosphaerula palustris E1-9c |
Kingdom | Archaea |
Replicon accession | NC_011832 |
Strand | + |
Start bp | 637996 |
End bp | 639465 |
Gene Length | 1470 bp |
Protein Length | 489 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 643569290 |
Product | Radical SAM domain protein |
Protein accession | YP_002465736 |
Protein GI | 219851304 |
COG category | [C] Energy production and conversion |
COG ID | [COG1032] Fe-S oxidoreductase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.83222 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCCGGG TCGTCTTTGT CAACCCCCTC GATTCGTCCA TTACAACAAC AGGCCTCGGC CTCAAAGCAC CGCCTCTGAA TCTTATGTAT CTTGCCGGTG CGGTTGAACA GGCAGGATTC TCCCCCAGTA TCGTTGACGC GAATCTCCTC AATGCCCCCC CGGAGAAGAT AACAGAGATC GTAGCACGGC TGCATCCTGA CCTGGTCGGT CTGACGGCTA CAACAGCAAC GATCTCAAAG GCGTTCCAGT ACGTCAGGAA AATTCGTGAT GCGGTACCTG AGTGTTTTAT TTTCATAGGT GGCCCGCATG TTACCTTCCT CCCCTCTGAG ACCCTTGCCG AATGCCGCGA ACTCAATGCC GTCGTCATCG GAGAAGGTGA GGAGACAGTC GTTGATCTGG TCACGTCATT CTCCATGACC GACCCTCACT GGCCGGAAAC GGTTCGGGGG ATTGCGTACA GGCGTAATGA CGGAGATAGG GAACGGATCG TCGTCACACC GGCAAGAGAA TTGATTCAGA ATCTGGATGC ATTGCCGTTT CCCGCCCGTC ATCTGGTCCC ATTCAACGAA TACAAACTGT TTGACAAGGA TGCAACAATC GGATATATGA TCACCAGCCG TGGCTGCACG TTTGCCTCCA ATTACTGCTC CTCCTCGCAC CTGATGGGTG GGATGTTTCG GGCGCGGTCT CCAAAAAATG TGGTTGACGA GGTGGAGGAA CTCGTTTCAA CCTACCATGT GGACACCATT GAGTTTCTTG ATGACAATTT TATGCTCAAT CGTTCCCGGG CCATCGATAT CGCCCATGAA ATTCGATCGA GGGGACTTGA TATCTCCTTC GTCGCCTCTT CCCGGGTGAA CGCGGTCAAT CGCGATCTGT TGATGGAATT AAAAAAGGCC GGTCTCTCTA CAATATATTA TGGTGTCGAA TCGGGTTCTT TGCGCACCCT GAAGTTGATG AACAAGCGAA TCACGTTATC CATGGCTGAG GATGCGGTCA GGATTGCAAA AGACTGCGGT ATCAGCGTAC TCACCTCGTT CATTATCGGG TATCCTGGGG AAACGTATGA GGATATGAAT GCAACAATCA GGTTTGCGAT CCGTCTCGAC CCCGATTATG CACAGTTCAC CATTCTCACC CCGTACCCGG GAACCCCGAT ATTTCAGGAA TTGAAGAAGA ACAACCTCCT AGCCACTGAA GATTGGGACC GCTACACTGT ACTTGAGCCC ATTATTCGAT ACGAAGCGTA CGGGCTGACT TCGCGGAAGA TCTCCCGCAA GCTCAAGGAG GCATATCTGC GGTTTTACCT GCGTCCAGGA TACCTGTTCA GGCGGTCCGG TCTTTTAAAA ACTGTACTCT ATACCCTGTA CCACAGTTAC TTCCGACCTG CATTCCTGCA CTCCGATCCT CAGGGTTGGT ACCGTAATTT TCCTGGCAAC GAGCTCTCGG ATTGCGAGAA GGGGACATAA
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Protein sequence | MTRVVFVNPL DSSITTTGLG LKAPPLNLMY LAGAVEQAGF SPSIVDANLL NAPPEKITEI VARLHPDLVG LTATTATISK AFQYVRKIRD AVPECFIFIG GPHVTFLPSE TLAECRELNA VVIGEGEETV VDLVTSFSMT DPHWPETVRG IAYRRNDGDR ERIVVTPARE LIQNLDALPF PARHLVPFNE YKLFDKDATI GYMITSRGCT FASNYCSSSH LMGGMFRARS PKNVVDEVEE LVSTYHVDTI EFLDDNFMLN RSRAIDIAHE IRSRGLDISF VASSRVNAVN RDLLMELKKA GLSTIYYGVE SGSLRTLKLM NKRITLSMAE DAVRIAKDCG ISVLTSFIIG YPGETYEDMN ATIRFAIRLD PDYAQFTILT PYPGTPIFQE LKKNNLLATE DWDRYTVLEP IIRYEAYGLT SRKISRKLKE AYLRFYLRPG YLFRRSGLLK TVLYTLYHSY FRPAFLHSDP QGWYRNFPGN ELSDCEKGT
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