Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mpal_0625 |
Symbol | |
ID | 7270212 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosphaerula palustris E1-9c |
Kingdom | Archaea |
Replicon accession | NC_011832 |
Strand | - |
Start bp | 620224 |
End bp | 623283 |
Gene Length | 3060 bp |
Protein Length | 1019 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 643569273 |
Product | UvrD/REP helicase |
Protein accession | YP_002465719 |
Protein GI | 219851287 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0210] Superfamily I DNA and RNA helicases [COG2887] RecB family exonuclease |
TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.243128 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCCTCA ACCCCGCCCA GCAGACCGCC GTGGAGAACG CCGGCACCCA GCTGATCCTG GCCGGCCCAG GCTCAGGCAA GACCCGTGTG ATCACCGAGA AGATCCTCCA CCTCCTCGAC CATGGCGTTC CCCCCACCGA GATCCTCGCC CTCACCTTCT CAGAGAAGGC CGCCGCCGAG ATGAACGACA GGATCGAGAT GAAACGCCCG AACCTCGACC TGGAGATCCA CACCTTCCAC TCCTTCTGCC TGGAGGTCCT CCAGGACAAC ATGCTGAGCA GCGGGCTGAA CGTCTCGGGC GGGGTGATCA GCCGGACCAG CCAGCTCGTC TGGGGGCTGC AGCATATCGA CATCTTCGAC TTTGAGCACA TCAAACTCGG GAACAACGCG GCCGACGTGA TCGAGGCGGT CATCGATGGG ATCAGTGCGT TCCGGGACGA ACTGATCGCA CCGGACGAGC TCGACGACTA CCTGACCCAA AAACAGTCGG TCCAGGTCGA GGAGGCCGAG CAGGAGTACC TACTGCAGCT CGGAGACCTG CTGAAGGTCT ACCGGGCCTA CGAGCAGTAC AAGCGGGAGC GGAACCTGAT CGACTTCGAC GATATGATCC ACGGGGCCGT CACCCTCTTT CGATCCGACC CGGCTCTCCG TTCATCGTAC CGGTCCCGGT TCCGGTACAT CCTGGTCGAC GAGTTCCAGG ACACCAACTA TGCCCAGCTC CAGCTGATCA AGGAGATCGC CGGCGAAAAC CTCTGCGTCG TCGGAGACGA CGACCAGACC ATCTACCGGT TCCGGGGCGC CTACCTCACC AACATCAGGG ACTTCAAGCA GTGGGCCGCC ACCCACACCG AGACCCTCCT CGACCAGAAT TACAGGAACT CAGGCGCAGT TCTCTCCCTT GCCCTCCAGG TGATGGCCGG CGCACCAGGC CGGAGAGAAA AGGCCCTCTT CACCGAGAAA GGCGATGGAG AACCGGTCAC CGTCGCCGCC TGCGGGAACG ATGCGGGTGA GGCCGAGTAC GTGGCAGCCG AGATCGAGAA GCTGGTCGGC ACCCCCTACC ACTCAAGGCA GGACGGAGGA GACCGACCGC TCGAATACCG CGACTTCACA GTCCTCTGTC GCACGAAGGC AGACGGAAAG AAGTTCCAGG CCGCCCTGCA GCGGCACGCC ATCCCCTGCG AGTACCAGGC GAACGTGGAC TTCATGCAGC TGCCGGTCGT CAGGGACATG GTCGCATACC TCCGGATCAT CGACAACCCG CTGATGGCCG CCGTCCCGCT GAACCGGGTC ATGAAGATCT GCTCCATCCC TGAGACCGTG GTGCAGAAGA TCAATGCGGC AGCGATAAAG AGGGGTGATG ACGACGATGA CGGCGTCTAT GAGACGATGC AGGACGCGGC TAGTATCGTC CCTGATCATG CAGAGCCGGT CGGAGAGGTC GTCCGGATGC TCGCCCCCTT CATCGAGCAG AAGGAGCGGT ACACCCTCCC GGAACTGGTC CATGCAGTGA TGATGCAGGC CTCCGGGCTG TACCGCTCGG CGCTCACCGA TACGGCAGAC ATGGTCAGGC TCTACCTCGC GACCTTCCAC GAGATCGTCC TGGAGTTCGA CCGGACGACT CCCGAGGCGA CCATCCCCGG CCTTCTCCAG TATTTGGAGC TGCTCGGCGC CTTCCCCGTG GAAGTCGTCA GAGAGCAGAA GGAGGCAGGT GACGCAGTGC AGATCCTGAC CGCCCACAAG AGCAAGGGGA AGGAGTTCCC GGTGGTCTTC GTCGCAGACC TGGCCAGGGA GAAGTTCCCA CTCAGGTACA GTCCCAAGCG GTTCCGGGTC CCCGGCGACC TGGCCCGGGG GCTCCGGACC GGCGACGATG AGAAGGCACT CTTTGTTCAG GAGGAACGCC GGCTCCTGTA CGTCGCGATG ACCCGAGCCG AGGAGCGGCT GTACCTGACC TATGCGAAGT GGTACGGTGA CAACAAACGT GAGAGGAAGC CGTCCCCGTT CCTGGAGGAA CTCAACTTCC GGGAGAACCC GCTCATCACG GTCGTCGAGC CCCCGGCCTG CGCCCCGGCC CTGCCGGTGA CGGCAGGAGA CCCTGTCGAG GATCTCCGAA CCTCGCTGCA GGAGGAGGTG GTCCGGGCTG TCTCGGAGAT GCGCATCTCC ACGGCCATCC AGACCCTTGT GACCCTCGAA GGAGTGCGGG AGTACGCAGA GCAGGGTACC GATGACTTCG ACCGGGACGC CTTCCTCGCG AAAGCAGGGA GCCGGGTCGG GGCCGACACC AGGATCACAA CCCTCCTCGA CCCGCCCCAC CAGTCGCTCA TCCCACCGAA CTACCGGTTC TCCGCCTCAG CCCTCTCGAC CTACCAGGAC TGCCCGCTTC AGTTCAAGTT CGCCAACCTC TACCGGGTCC CGCTGCCCAG GCAGCCCCAG CTGGTCTTCG GTTCCACCCT CCATTCGGTG ATCGAGCACC TCACCAGGAA CCCCGACCCC TCACAGTCGC TCCGCGACCA GGGGCTCGCA CTCCTCGAAG AGTACTGGTC CCCAGAGCCG TACGAATCGA AGACCCAGGA GTCGGAGGCC CACGATTCGG CATCGGCTCT CCTCGACACC TATCTGGCAT GGCAGGCAGG AAACCCAAAT ACCGTGATCG GGGTCGAGAA GGAGTTCACC TTCTCCTTCG CCGGTCATAG CATCCATGGA TTTATCGACC GGCTCGAGCA AACTCCGGAC GGAAATTATG TGGTGATCGA CTTCAAGTCA GGCAAGAAAC CCGACTCCCT CACGAAGAAA GCGGTCGGCG AACATATCCA GCTGAACCTT TACTCCATGG CTGTCCAGCA GATGTATCAG GTACTCCCGG AGAAGGCCGA GCTCTTCTAC TTAAAGGATG GAAAACGGGT CTCGTATCTC CCGACCGAGG AGACGATCCA GGTCTTCACT GGGACACTCA GCACCCTGAT CGGAGGGATC ACCAGGGAAG AGTTTCCACC CAAGTCGGAC AATCAGAGAT GCCAGTGGTG TGCGTACCGA CCCCTCTGTG GTACAGATCT GAAAGGCTAA
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Protein sequence | MSLNPAQQTA VENAGTQLIL AGPGSGKTRV ITEKILHLLD HGVPPTEILA LTFSEKAAAE MNDRIEMKRP NLDLEIHTFH SFCLEVLQDN MLSSGLNVSG GVISRTSQLV WGLQHIDIFD FEHIKLGNNA ADVIEAVIDG ISAFRDELIA PDELDDYLTQ KQSVQVEEAE QEYLLQLGDL LKVYRAYEQY KRERNLIDFD DMIHGAVTLF RSDPALRSSY RSRFRYILVD EFQDTNYAQL QLIKEIAGEN LCVVGDDDQT IYRFRGAYLT NIRDFKQWAA THTETLLDQN YRNSGAVLSL ALQVMAGAPG RREKALFTEK GDGEPVTVAA CGNDAGEAEY VAAEIEKLVG TPYHSRQDGG DRPLEYRDFT VLCRTKADGK KFQAALQRHA IPCEYQANVD FMQLPVVRDM VAYLRIIDNP LMAAVPLNRV MKICSIPETV VQKINAAAIK RGDDDDDGVY ETMQDAASIV PDHAEPVGEV VRMLAPFIEQ KERYTLPELV HAVMMQASGL YRSALTDTAD MVRLYLATFH EIVLEFDRTT PEATIPGLLQ YLELLGAFPV EVVREQKEAG DAVQILTAHK SKGKEFPVVF VADLAREKFP LRYSPKRFRV PGDLARGLRT GDDEKALFVQ EERRLLYVAM TRAEERLYLT YAKWYGDNKR ERKPSPFLEE LNFRENPLIT VVEPPACAPA LPVTAGDPVE DLRTSLQEEV VRAVSEMRIS TAIQTLVTLE GVREYAEQGT DDFDRDAFLA KAGSRVGADT RITTLLDPPH QSLIPPNYRF SASALSTYQD CPLQFKFANL YRVPLPRQPQ LVFGSTLHSV IEHLTRNPDP SQSLRDQGLA LLEEYWSPEP YESKTQESEA HDSASALLDT YLAWQAGNPN TVIGVEKEFT FSFAGHSIHG FIDRLEQTPD GNYVVIDFKS GKKPDSLTKK AVGEHIQLNL YSMAVQQMYQ VLPEKAELFY LKDGKRVSYL PTEETIQVFT GTLSTLIGGI TREEFPPKSD NQRCQWCAYR PLCGTDLKG
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