| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpal_0609 |
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| Symbol | |
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| ID | 7270196 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosphaerula palustris E1-9c |
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| Kingdom | Archaea |
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| Replicon accession | NC_011832 |
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| Strand | - |
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| Start bp | 597340 |
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| End bp | 598326 |
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| Gene Length | 987 bp |
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| Protein Length | 328 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 643569257 |
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| Product | histone deacetylase superfamily |
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| Protein accession | YP_002465703 |
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| Protein GI | 219851271 |
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| COG category | [B] Chromatin structure and dynamics
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0123] Deacetylases, including yeast histone deacetylase and acetoin utilization protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCCCAC GCTGCTCGGT GATCCAGGGA CAGGTCTTCT CGGCTCACGA CCTCTGCCTC
CATGACGAGT GCAGCACACG GCTCCGCGAA GTGGAGGCCG GGATTCCCCG GGGTGTGGTG
ACGCACGACC CGGTGATGGC CACAGAGGCC GACCTCCTGA CGGTTCACGA TTACCATTAT
GTCAGGAGGA TCAGGTCGCT CTGCTGTGAT GGCGGCGTAT ATTACCTCGA CCCCTCCACC
TACCTGACCG CAGAATCGTT CACCGTCGCT TCATTCGCAG CAGGATCCGC CATCGATGCT
GCTCAAAGGG CACTGGACGG GGAGCATTGT TTCGCCCTGG TCAGGCCACC CGGACACCAT
GCAGAACCCG ACAGGGGGAT GGGATTCTGC CTCTTCAACA ACGCAGCGAT CGCTGCGACC
CATCTGCAGA GAGAAGGGAT GCGAGTCGCG ATCGTGGACT GGGATCTGCA TCATGGCAAC
GGAACCCAGA AGATCTTCTA CAGTTCAGAT CAGGTCCTCT ACTGTTCTAT TCATCAGCAG
AACACATTCC CCCGCACAGG CTGGGTCGAT GAGATCGGCA CCGGAGCCGG CAAGGGATTC
ACCCTGAACG CCCCCCTCCA ACCCGGCGCG ACCATCACCG ATTACCGACT GGTCCTGGAA
GAGATATTTG GTGCTGCGAT CAAGCGGTTC AGACCGGACC TGGTGATCGT CTCTGCAGGG
CAGGATCCGC TCGGCGACGA TCCCAAAAGC GGGATGCTCC TTCGCCCCCA GGACTTCGGG
ACGATGGCCG GGATCCTCGC GGGGACGGTG GAGACCCCGC TCGCCCTGGT GCTGGAAGGG
GGGTATGGCC CGTCCCACCA CCTGGCGATC GCCGAGGTGC TCAAAACACT GCAGGGAAAG
AGCAGGGTGC GTGAAGAGGG AGAGGTCAGC GCCGCCCCGC TCAGGTCTAC AAGGGAGATT
GTATCGTTGT TGAAGCGACT GATCTGA
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| Protein sequence | MSPRCSVIQG QVFSAHDLCL HDECSTRLRE VEAGIPRGVV THDPVMATEA DLLTVHDYHY
VRRIRSLCCD GGVYYLDPST YLTAESFTVA SFAAGSAIDA AQRALDGEHC FALVRPPGHH
AEPDRGMGFC LFNNAAIAAT HLQREGMRVA IVDWDLHHGN GTQKIFYSSD QVLYCSIHQQ
NTFPRTGWVD EIGTGAGKGF TLNAPLQPGA TITDYRLVLE EIFGAAIKRF RPDLVIVSAG
QDPLGDDPKS GMLLRPQDFG TMAGILAGTV ETPLALVLEG GYGPSHHLAI AEVLKTLQGK
SRVREEGEVS AAPLRSTREI VSLLKRLI
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