| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpal_0578 |
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| Symbol | |
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| ID | 7270162 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosphaerula palustris E1-9c |
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| Kingdom | Archaea |
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| Replicon accession | NC_011832 |
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| Strand | - |
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| Start bp | 571590 |
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| End bp | 573650 |
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| Gene Length | 2061 bp |
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| Protein Length | 686 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 643569223 |
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| Product | formate dehydrogenase, alpha subunit |
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| Protein accession | YP_002465672 |
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| Protein GI | 219851240 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3383] Uncharacterized anaerobic dehydrogenase |
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| TIGRFAM ID | [TIGR01591] formate dehydrogenase, alpha subunit, archaeal-type |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0413343 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.361775 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAGATGA AATACGTACC AACGACCTGT CCGTACTGCG GAACAGGTTG CGGGTTCAAT
CTTGTCGTCA AAGACGGGAA GGTTGTCGAC ACCGCACCAT GGCATCGTGC CCCAGTAAAC
CAGGGCAAGA CATGTGCAAA GGGGAATTAT GCAGCCGAGT TTGTAAACAG CCCGGACCGG
CTGACCACCC CCCTGATCAA GAAGGATGGC ACGTTCGTCG AGGCATCCTG GGACGAAGCA
TACGCACTGA TCGTTTCCAA GTTCAAAGCA TACAAGCCAG AAGAGATGGC GTGTCTTGCA
TCTGCCCGTG TCTCCAATGA AGAGAATTAC CTGTTGCAGA AATTTGCTCG TGCCGTCCTC
AAAACACCAC ACGTCGACCA CTGCGCCAGG CTGTGCCACG CATCAACCGT CGCCGGCCTT
GCAGCCGTCT TCGGGTCAGG GGCCATGACC AACTCGATCG AGGATATCAG CGAGGCAAAG
TGCATCTTTG TGATCGGGTC CAACACTTTT GAGCAGCATC CCCTGATCGG CCGCCGGATC
ATGATGGCCA GGCTGAACGG GGTAAAAGTG ATCGTTGCAG ATCCAAGGTT CACCCCCACC
GCCAAGCAGG CCGATCTGTA CCTGCCCTTC TTCTCAGGCA CCGATGTCGC CCTGCTGAAC
GGGCTGATGC AGCACATCAT CAAGAATGGA TGGGAGGATA AGGAGTTCAT TGCAAAGCGG
ACCAAGGACT TTGACAAACT CAAAGAGGTC GTGATGAAGG ACACTTACAG CCTCGAAAAC
GTGGCAAAGG TCACCGGTCT CCCGGCAGCG GACATCGCCA CTGCAGCCGA GTGGATCGCA
AAGGCCGAGT CCAGTGCACT TCTCTATTCG ATGGGCATCA CCCAGCACAC CGTTGGTGTC
GATAATGTGA AGTCCACAGC CAACCTGCAG ATGATCACCG GAAACCTCGG CAAGCGGGGC
GCCGGCGTCT GCGCACTTCG TGGCCAGAAC AATGTGCAGG GAGCCTGCGA CATGGGCTGC
CTGCCGAACG TCTACTCAGG CTACCAGCAG GTCGCCAACT CAGATCTCCA CAAGAAGATG
ACCGAGGCAT GGGGATGCGA CATCGCCGAG GGCAAGGTCG GGTACACCGT CACCAAGATG
ATCAACGTTC TCGCTGATGA GCCTGGCACC CTGAAATGCA TGTACGTCAT GGGCGAGAAT
CCGATGATCT CTGATCCTGA TCTTCACCAC GTCGAGAAGG GATTGAAAAA CCTCGAATTT
ATGGTCGTAC AGGATATCTT CCTGACTGAG ACCGCTGAAC TTGCAGACGT TGTCCTTCCG
GGCTCCTGCT ACGCAGAGCG CGACGGAACC CAGACCAACA CCGAGCGGCG TGTCCAGCTC
TGGAGAAAGG CGCAGGATGC ACCAGGACAG GCAAAGCCCG ACTGGCAGAT CATCTGTGAA
CTCGGGGCCG CAATGGGTTA CGAGAAGCAG TTTGCATTCA AGAGTCCTGA AGAGATCTTC
AACGAAGTGG CCAAGGTCAC ACCATCCTAT GGCGGTATGA CCTATGCACG CTTAGGCGCC
GAAGGGCTCC ACTGGCCATG CCCAACCGCA GAGCACCCCG GAACACCGGT CCTCCACAAG
GAGAAGTTCG GAACACCTGA TGGTCTCGGC ATCCTCACCC CCATCGAATG GAAACAACCG
GCAGAAGTAC CGGATGCGGA GTACCCACTC CTCCTCACCA CCGGCCGCTG CATGTGGCAC
TGGCATACCG GGACGATGAC CCGCCGCTCG GAGAGTCTCG AACGCGAGGA ACCGACCGGC
TGGGTCGAGA TGAACCCTGA AGATGCAAAG GCACTGGGCA TCAAGGACAA GGAGATGATC
CGGGCAATCT CCCGCAGAGG AGAGATCAAT ATCGGTGCAC GGGTTACAAA GGACATAAAG
AAAGGTGTTG TCTTCATGCC ATTCCACTTC AAGGAGTGCG CAGCAAACAT CCTGACCAAC
AATGCACTCG ACCCGATAGC GAGCATTCCA GAGTACAAGG CGTGCTCTGT GAGGATTGAG
AAGATTCCGG AGGTACAGTA A
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| Protein sequence | MEMKYVPTTC PYCGTGCGFN LVVKDGKVVD TAPWHRAPVN QGKTCAKGNY AAEFVNSPDR
LTTPLIKKDG TFVEASWDEA YALIVSKFKA YKPEEMACLA SARVSNEENY LLQKFARAVL
KTPHVDHCAR LCHASTVAGL AAVFGSGAMT NSIEDISEAK CIFVIGSNTF EQHPLIGRRI
MMARLNGVKV IVADPRFTPT AKQADLYLPF FSGTDVALLN GLMQHIIKNG WEDKEFIAKR
TKDFDKLKEV VMKDTYSLEN VAKVTGLPAA DIATAAEWIA KAESSALLYS MGITQHTVGV
DNVKSTANLQ MITGNLGKRG AGVCALRGQN NVQGACDMGC LPNVYSGYQQ VANSDLHKKM
TEAWGCDIAE GKVGYTVTKM INVLADEPGT LKCMYVMGEN PMISDPDLHH VEKGLKNLEF
MVVQDIFLTE TAELADVVLP GSCYAERDGT QTNTERRVQL WRKAQDAPGQ AKPDWQIICE
LGAAMGYEKQ FAFKSPEEIF NEVAKVTPSY GGMTYARLGA EGLHWPCPTA EHPGTPVLHK
EKFGTPDGLG ILTPIEWKQP AEVPDAEYPL LLTTGRCMWH WHTGTMTRRS ESLEREEPTG
WVEMNPEDAK ALGIKDKEMI RAISRRGEIN IGARVTKDIK KGVVFMPFHF KECAANILTN
NALDPIASIP EYKACSVRIE KIPEVQ
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