| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpal_0572 |
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| Symbol | |
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| ID | 7270156 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosphaerula palustris E1-9c |
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| Kingdom | Archaea |
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| Replicon accession | NC_011832 |
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| Strand | - |
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| Start bp | 565613 |
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| End bp | 566659 |
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| Gene Length | 1047 bp |
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| Protein Length | 348 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 643569218 |
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| Product | tRNA splicing endonuclease |
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| Protein accession | YP_002465667 |
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| Protein GI | 219851235 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1676] tRNA splicing endonuclease |
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| TIGRFAM ID | [TIGR00324] tRNA intron endonuclease |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.199191 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.204631 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCACCATT TTAAAACCTG CCCCTCCAAT AAGTTCCTTG TGAAGGGGAG CGTCGACGGG
ACCTCGGTGA GGCTCGGGAT GGATGGGCTT GTGCTCTATG AGCAGAGTGG CTATGGAAGG
CCGGAGAAGG ACGGGCTGCG GCTGGCCCCT CAGGAGGCGC TGTACCTGGT CTACCGGTCC
AAGATCACCA TTGAAGGATA TGATCTGGAG AGCCTGATCT CATACTTCTG TGAACAGGAG
TTGTTCTTCC GAAGTTTCAT CGTCTACCGG GACCTCCGCG AACGGGGGTA CGTGGTCCAG
ACCGGGCCCC ATGATTTCCG GGTCTTCCGG CGGGGGCAGC GGCCCGGTGT CGGTACCTCG
CAGTACATGG TCAGAGTTCT TTCAGAACGG GACCTGATCG ACTTCGAGGT GCTGATCAGC
GAGGCGGCAG CCTCAATCAA TATGCGCAAA CAGCATGTGC TGGCCGTTGT CGACGACGAA
GGGGAACTGA CCTACTACGA GATCAAACTC CAGCCCCTGC AGAAGGACCA ACCTGAGCCC
ACCCTTGAAC CAGTGGATGG TCTCCTCACC GGCAGATCGG TGCTGATCCC GGGGGCGGCC
GGCTCAGTGT TCGAAGCGGC CGGTTACGGG AAACGGTTCG ATGATCAGAG ACTGATGCTC
TCGCTGGTCG AGGCGGGCTA TCTGCAGAAG AGGGAAATTC TAACCGTGCA TCATAGAGAT
CAGATCCTCT CTCCTGGAGA GTATACCGAA CTCTTCAAAG CAGACGATGC CGAGGCCACC
GAGAAGGCTG CGGTGTATGA CCAGATCCGG GACCTTGGAT ATATCCCTCG GACCGGGTAC
AAGTTCGGCC ACCACTTCAG GGTCTATGTC TGTGGCATGT CCCATTCAGA TCTGCTGATC
CATGCGATCG CCAGAGGTAC AGCACTGCCG ATGAGTGTGA TATCCCGTTC GGTCAGGCTC
GCCCACAGTG TCAAAAAGAA GATGTTGTTT GGATGTGTAC ATACTACCGG AATTCAGTAC
ATCGAATTCG GACGAATCAA GTTATGA
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| Protein sequence | MHHFKTCPSN KFLVKGSVDG TSVRLGMDGL VLYEQSGYGR PEKDGLRLAP QEALYLVYRS
KITIEGYDLE SLISYFCEQE LFFRSFIVYR DLRERGYVVQ TGPHDFRVFR RGQRPGVGTS
QYMVRVLSER DLIDFEVLIS EAAASINMRK QHVLAVVDDE GELTYYEIKL QPLQKDQPEP
TLEPVDGLLT GRSVLIPGAA GSVFEAAGYG KRFDDQRLML SLVEAGYLQK REILTVHHRD
QILSPGEYTE LFKADDAEAT EKAAVYDQIR DLGYIPRTGY KFGHHFRVYV CGMSHSDLLI
HAIARGTALP MSVISRSVRL AHSVKKKMLF GCVHTTGIQY IEFGRIKL
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