Gene Mpal_0561 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpal_0561 
Symbol 
ID7271977 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosphaerula palustris E1-9c 
KingdomArchaea 
Replicon accessionNC_011832 
Strand
Start bp553810 
End bp554640 
Gene Length831 bp 
Protein Length276 aa 
Translation table11 
GC content55% 
IMG OID643569208 
Productnitrogenase iron protein 
Protein accessionYP_002465657 
Protein GI219851225 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1348] Nitrogenase subunit NifH (ATPase) 
TIGRFAM ID[TIGR01287] nitrogenase iron protein 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000368653 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.199489 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAGAC AGGTAGCAAT CTACGGAAAA GGCGGAATCG GAAAGTCGAC AACAACCCAG 
AACACTGTCG CGGCACTGGC TGAACAGGGG AAGAAGATCA TGGTGGTTGG ATGCGACCCC
AAAGCCGACT CCACCAGACT TCTGCTCCAC GGACTCTGTC AGAAGACAGT GCTGGACACC
CTGCGGGACG AAGGAGACGA TATCGAACTG GACGAGATCC TCAAACCGGG ATATCGGGAC
ACCCTCTGTG TTGAATCAGG AGGCCCGGAG CCTGGCGTTG GATGTGCCGG CCGTGGTATC
ATCACGTCGA TCAACCTGCT GGAGTCACTC GGGGCATATA CCGACGACCT GGACTATGTC
TTCTACGATG TGCTTGGGGA TGTCGTCTGC GGGGGGTTCG CGATGCCAAT CAGGGAAGGA
AAGGCAGAGG AGATCTATAT CGTCGCCTCC GGGGAGTTGA TGGCGCTGTA TGCGGCCAAC
AACATCGCCA AGGGGATCCA TAAGTACGCC GTATCAGGCA AGGTCAGGCT GGGAGGAATC
ATCTGCAACA GCCGACAGGT CGACAATGAG TATCCCCTCC TCAAGGCATT TGCCGAGGAA
CTTGGATCCC AGTTGATCTA CTTTGTCCCA CGGGACAATC TGGTGCAGCG GGCTGAGATC
AATAAGAAGA CGGTGATCGA CTTCGAACCG GAGTCCAACC AAGCTGAGGA ATACAGGCAG
CTGGCCAAGG CCATTGATGA GAACAGGATG TTTGTCATCC CGAAACCGAT GACACAGGAC
CGGCTGGAAG AACTGATGAT GCAGCATGGA TTCATGGATG CACTTGTGTA A
 
Protein sequence
MKRQVAIYGK GGIGKSTTTQ NTVAALAEQG KKIMVVGCDP KADSTRLLLH GLCQKTVLDT 
LRDEGDDIEL DEILKPGYRD TLCVESGGPE PGVGCAGRGI ITSINLLESL GAYTDDLDYV
FYDVLGDVVC GGFAMPIREG KAEEIYIVAS GELMALYAAN NIAKGIHKYA VSGKVRLGGI
ICNSRQVDNE YPLLKAFAEE LGSQLIYFVP RDNLVQRAEI NKKTVIDFEP ESNQAEEYRQ
LAKAIDENRM FVIPKPMTQD RLEELMMQHG FMDALV