Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mpal_0561 |
Symbol | |
ID | 7271977 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosphaerula palustris E1-9c |
Kingdom | Archaea |
Replicon accession | NC_011832 |
Strand | - |
Start bp | 553810 |
End bp | 554640 |
Gene Length | 831 bp |
Protein Length | 276 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 643569208 |
Product | nitrogenase iron protein |
Protein accession | YP_002465657 |
Protein GI | 219851225 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1348] Nitrogenase subunit NifH (ATPase) |
TIGRFAM ID | [TIGR01287] nitrogenase iron protein |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.0000368653 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.199489 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAAGAC AGGTAGCAAT CTACGGAAAA GGCGGAATCG GAAAGTCGAC AACAACCCAG AACACTGTCG CGGCACTGGC TGAACAGGGG AAGAAGATCA TGGTGGTTGG ATGCGACCCC AAAGCCGACT CCACCAGACT TCTGCTCCAC GGACTCTGTC AGAAGACAGT GCTGGACACC CTGCGGGACG AAGGAGACGA TATCGAACTG GACGAGATCC TCAAACCGGG ATATCGGGAC ACCCTCTGTG TTGAATCAGG AGGCCCGGAG CCTGGCGTTG GATGTGCCGG CCGTGGTATC ATCACGTCGA TCAACCTGCT GGAGTCACTC GGGGCATATA CCGACGACCT GGACTATGTC TTCTACGATG TGCTTGGGGA TGTCGTCTGC GGGGGGTTCG CGATGCCAAT CAGGGAAGGA AAGGCAGAGG AGATCTATAT CGTCGCCTCC GGGGAGTTGA TGGCGCTGTA TGCGGCCAAC AACATCGCCA AGGGGATCCA TAAGTACGCC GTATCAGGCA AGGTCAGGCT GGGAGGAATC ATCTGCAACA GCCGACAGGT CGACAATGAG TATCCCCTCC TCAAGGCATT TGCCGAGGAA CTTGGATCCC AGTTGATCTA CTTTGTCCCA CGGGACAATC TGGTGCAGCG GGCTGAGATC AATAAGAAGA CGGTGATCGA CTTCGAACCG GAGTCCAACC AAGCTGAGGA ATACAGGCAG CTGGCCAAGG CCATTGATGA GAACAGGATG TTTGTCATCC CGAAACCGAT GACACAGGAC CGGCTGGAAG AACTGATGAT GCAGCATGGA TTCATGGATG CACTTGTGTA A
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Protein sequence | MKRQVAIYGK GGIGKSTTTQ NTVAALAEQG KKIMVVGCDP KADSTRLLLH GLCQKTVLDT LRDEGDDIEL DEILKPGYRD TLCVESGGPE PGVGCAGRGI ITSINLLESL GAYTDDLDYV FYDVLGDVVC GGFAMPIREG KAEEIYIVAS GELMALYAAN NIAKGIHKYA VSGKVRLGGI ICNSRQVDNE YPLLKAFAEE LGSQLIYFVP RDNLVQRAEI NKKTVIDFEP ESNQAEEYRQ LAKAIDENRM FVIPKPMTQD RLEELMMQHG FMDALV
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